BLASTX nr result

ID: Coptis21_contig00029274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029274
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534851.1| PREDICTED: DNA replication licensing factor ...   266   2e-69
gb|AAN73052.2| mini-chromosome maintenance protein MCM6 [Pisum s...   264   6e-69
ref|XP_003635008.1| PREDICTED: DNA replication licensing factor ...   264   6e-69
emb|CBI29412.3| unnamed protein product [Vitis vinifera]              264   6e-69
emb|CAN77381.1| hypothetical protein VITISV_029723 [Vitis vinifera]   264   6e-69

>ref|XP_003534851.1| PREDICTED: DNA replication licensing factor MCM6 [Glycine max]
          Length = 863

 Score =  266 bits (679), Expect = 2e-69
 Identities = 131/153 (85%), Positives = 140/153 (91%)
 Frame = +1

Query: 1   LVSVSGVVTRTSEVRPELLQGTFKCLKCATVMKNVEQQFKYTEPIICVNATCSERNQWVL 180
           LVSV+GVVTRTSEVRPELLQGTFKCL+C  V+KNVEQQFKYTEP IC NATCS R +WVL
Sbjct: 131 LVSVTGVVTRTSEVRPELLQGTFKCLECGGVIKNVEQQFKYTEPTICTNATCSNRTRWVL 190

Query: 181 LRQDSKFADWQRVRMQETSKEIPPGSLPRSLDVILRHEIVEQARAGDTVIFTGTLVVIPD 360
           LRQ+SKFADWQRVRMQETSKEIP GSLPRSLDVILRHEIVEQARAGDTVIFTGT+V IPD
Sbjct: 191 LRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEIVEQARAGDTVIFTGTVVAIPD 250

Query: 361 IMALASPGERAECRRERSQRPNSSGGNEGVRGL 459
           IMALASPGER+ECRR+ SQR  S+ GNEGV GL
Sbjct: 251 IMALASPGERSECRRDASQRRGSTAGNEGVSGL 283


>gb|AAN73052.2| mini-chromosome maintenance protein MCM6 [Pisum sativum]
          Length = 827

 Score =  264 bits (674), Expect = 6e-69
 Identities = 129/153 (84%), Positives = 139/153 (90%)
 Frame = +1

Query: 1   LVSVSGVVTRTSEVRPELLQGTFKCLKCATVMKNVEQQFKYTEPIICVNATCSERNQWVL 180
           LVSV+GVVTRTSEVRPELLQGTFKCL+C  V+KNVEQQFKYTEP IC NATC+ R +W L
Sbjct: 130 LVSVTGVVTRTSEVRPELLQGTFKCLECGGVIKNVEQQFKYTEPTICPNATCNNRTRWAL 189

Query: 181 LRQDSKFADWQRVRMQETSKEIPPGSLPRSLDVILRHEIVEQARAGDTVIFTGTLVVIPD 360
           LRQ+SKF DWQRVRMQETSKEIP GSLPRSLDVILRHEIVE ARAGDTVIFTGT++VIPD
Sbjct: 190 LRQESKFTDWQRVRMQETSKEIPAGSLPRSLDVILRHEIVEHARAGDTVIFTGTVIVIPD 249

Query: 361 IMALASPGERAECRRERSQRPNSSGGNEGVRGL 459
           I+ALASPGER+ECRRE SQR  SS GNEGVRGL
Sbjct: 250 ILALASPGERSECRREASQRKGSSSGNEGVRGL 282


>ref|XP_003635008.1| PREDICTED: DNA replication licensing factor MCM6 [Vitis vinifera]
          Length = 812

 Score =  264 bits (674), Expect = 6e-69
 Identities = 127/153 (83%), Positives = 143/153 (93%)
 Frame = +1

Query: 1   LVSVSGVVTRTSEVRPELLQGTFKCLKCATVMKNVEQQFKYTEPIICVNATCSERNQWVL 180
           LVS++GVVTRTSEVRPELLQGTFKCL+C +V+KNVEQQFKYTEP+IC+NATC+ R +W L
Sbjct: 131 LVSITGVVTRTSEVRPELLQGTFKCLECGSVIKNVEQQFKYTEPVICMNATCANRTKWAL 190

Query: 181 LRQDSKFADWQRVRMQETSKEIPPGSLPRSLDVILRHEIVEQARAGDTVIFTGTLVVIPD 360
           +RQ+SKFADWQRVRMQETSKEIP GSLPRSLDVILRHEIVEQARAGDTVIFTGT+VVIPD
Sbjct: 191 VRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEIVEQARAGDTVIFTGTVVVIPD 250

Query: 361 IMALASPGERAECRRERSQRPNSSGGNEGVRGL 459
           I ALASPGERAECRR+  QR NS+ G++GVRGL
Sbjct: 251 ISALASPGERAECRRDAPQRKNSAVGHDGVRGL 283


>emb|CBI29412.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  264 bits (674), Expect = 6e-69
 Identities = 127/153 (83%), Positives = 143/153 (93%)
 Frame = +1

Query: 1   LVSVSGVVTRTSEVRPELLQGTFKCLKCATVMKNVEQQFKYTEPIICVNATCSERNQWVL 180
           LVS++GVVTRTSEVRPELLQGTFKCL+C +V+KNVEQQFKYTEP+IC+NATC+ R +W L
Sbjct: 131 LVSITGVVTRTSEVRPELLQGTFKCLECGSVIKNVEQQFKYTEPVICMNATCANRTKWAL 190

Query: 181 LRQDSKFADWQRVRMQETSKEIPPGSLPRSLDVILRHEIVEQARAGDTVIFTGTLVVIPD 360
           +RQ+SKFADWQRVRMQETSKEIP GSLPRSLDVILRHEIVEQARAGDTVIFTGT+VVIPD
Sbjct: 191 VRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEIVEQARAGDTVIFTGTVVVIPD 250

Query: 361 IMALASPGERAECRRERSQRPNSSGGNEGVRGL 459
           I ALASPGERAECRR+  QR NS+ G++GVRGL
Sbjct: 251 ISALASPGERAECRRDAPQRKNSAVGHDGVRGL 283


>emb|CAN77381.1| hypothetical protein VITISV_029723 [Vitis vinifera]
          Length = 807

 Score =  264 bits (674), Expect = 6e-69
 Identities = 127/153 (83%), Positives = 143/153 (93%)
 Frame = +1

Query: 1   LVSVSGVVTRTSEVRPELLQGTFKCLKCATVMKNVEQQFKYTEPIICVNATCSERNQWVL 180
           LVS++GVVTRTSEVRPELLQGTFKCL+C +V+KNVEQQFKYTEP+IC+NATC+ R +W L
Sbjct: 131 LVSITGVVTRTSEVRPELLQGTFKCLECGSVIKNVEQQFKYTEPVICMNATCANRTKWAL 190

Query: 181 LRQDSKFADWQRVRMQETSKEIPPGSLPRSLDVILRHEIVEQARAGDTVIFTGTLVVIPD 360
           +RQ+SKFADWQRVRMQETSKEIP GSLPRSLDVILRHEIVEQARAGDTVIFTGT+VVIPD
Sbjct: 191 VRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEIVEQARAGDTVIFTGTVVVIPD 250

Query: 361 IMALASPGERAECRRERSQRPNSSGGNEGVRGL 459
           I ALASPGERAECRR+  QR NS+ G++GVRGL
Sbjct: 251 ISALASPGERAECRRDAPQRKNSAVGHDGVRGL 283


Top