BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029270
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532856.1| pentatricopeptide repeat-containing protein,...   338   1e-90
ref|XP_002314181.1| predicted protein [Populus trichocarpa] gi|2...   335   1e-89
emb|CBI16134.3| unnamed protein product [Vitis vinifera]              334   2e-89
ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containi...   334   2e-89
ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containi...   326   5e-87

>ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527393|gb|EEF29534.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score =  338 bits (867), Expect = 1e-90
 Identities = 171/267 (64%), Positives = 202/267 (75%), Gaps = 4/267 (1%)
 Frame = +3

Query: 96  FAQVMQRAKSLFLFSHRSLFNSFTQRLTIS----SSESEPPHCLSFRVEKLGREEAVTCA 263
           F+Q + R  S+   +H +     TQ   +       + E P  LS R+EKL R E +  A
Sbjct: 12  FSQAIHRTLSIAYQNHYNFNFLCTQTTDVKILEPEEQEENPKSLSLRIEKLPRGEPIGLA 71

Query: 264 FQSWMGEGFPIHRGDIFHAIXXXXXXXXXXXALEVMEWVIRERPYKLKELDYSYLLEFTF 443
           FQSWM EGFPIHRGD+FHAI           ALEVMEWVIRERPY+ KELDYSYLLEFT 
Sbjct: 72  FQSWMREGFPIHRGDVFHAINRLRKLKLNKRALEVMEWVIRERPYRPKELDYSYLLEFTT 131

Query: 444 KFHGVWYGESLFSRIPVEFQNDLLYNNLVIACLDQGRIRLSLAYMRKMREHGYPISHLVF 623
           K HG+ +GE LF+RIP EFQN+LLYNNLVIACL++G IRLSL YM+KMRE G+PISHL+F
Sbjct: 132 KLHGISHGEKLFTRIPTEFQNELLYNNLVIACLEKGVIRLSLEYMKKMRELGHPISHLIF 191

Query: 624 NRLITLHSSPGRKKAIPRILAQMKADKVAPHVSTYNILLKIEADGNNIESLTKVFGEMKR 803
           NRLI LHSSPGR+K IP+IL QMKADKV  HVSTYNIL+KIEA+ +N+E L KVFGEMKR
Sbjct: 192 NRLIILHSSPGRRKMIPKILTQMKADKVVRHVSTYNILMKIEANEHNVEGLIKVFGEMKR 251

Query: 804 ANVEPNEITYCILATAHSVARLYSVAE 884
             VEPNE+++CILA AH+VARLY+VAE
Sbjct: 252 LEVEPNEVSFCILAIAHAVARLYTVAE 278


>ref|XP_002314181.1| predicted protein [Populus trichocarpa] gi|222850589|gb|EEE88136.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  335 bits (858), Expect = 1e-89
 Identities = 166/260 (63%), Positives = 201/260 (77%)
 Frame = +3

Query: 105 VMQRAKSLFLFSHRSLFNSFTQRLTISSSESEPPHCLSFRVEKLGREEAVTCAFQSWMGE 284
           V Q   + F F +    + F ++    S + E P CLS R+EKL R E+V  AFQSWMGE
Sbjct: 27  VYQTPYTCFNFLNTHTIDKFPKK----SLDPEGPKCLSSRIEKLPRGESVGYAFQSWMGE 82

Query: 285 GFPIHRGDIFHAIXXXXXXXXXXXALEVMEWVIRERPYKLKELDYSYLLEFTFKFHGVWY 464
           GFPIHRGD+FH I           ALEVMEWV+RERPY+LKELDYSYLLEFT K HG+ +
Sbjct: 83  GFPIHRGDVFHTINRLRKLRLNKRALEVMEWVVRERPYRLKELDYSYLLEFTTKHHGISH 142

Query: 465 GESLFSRIPVEFQNDLLYNNLVIACLDQGRIRLSLAYMRKMREHGYPISHLVFNRLITLH 644
           GE LF  +P EFQN+LLYNNLVI+CL++G IRLSL YM+KMRE G+PIS+L+FNRLI LH
Sbjct: 143 GEKLFLHVPSEFQNELLYNNLVISCLEKGVIRLSLDYMKKMREQGHPISYLIFNRLIILH 202

Query: 645 SSPGRKKAIPRILAQMKADKVAPHVSTYNILLKIEADGNNIESLTKVFGEMKRANVEPNE 824
           SSPG +K IP+ILAQM+ADKV PHVSTYNIL+KIEA+ +NI+ L KVF +MKR  VEPNE
Sbjct: 203 SSPGSRKMIPKILAQMRADKVVPHVSTYNILMKIEANEHNIDGLVKVFNDMKRFKVEPNE 262

Query: 825 ITYCILATAHSVARLYSVAE 884
           +++CILATAH+ ARLY+VAE
Sbjct: 263 VSFCILATAHAAARLYTVAE 282


>emb|CBI16134.3| unnamed protein product [Vitis vinifera]
          Length = 453

 Score =  334 bits (856), Expect = 2e-89
 Identities = 172/251 (68%), Positives = 198/251 (78%), Gaps = 7/251 (2%)
 Frame = +3

Query: 153 FNSF-TQRLTISSSESEPPH------CLSFRVEKLGREEAVTCAFQSWMGEGFPIHRGDI 311
           FN F T+   +S  ES  P+       LS+R+EKL R E V  AFQSWMGEG PIHRG I
Sbjct: 33  FNPFGTETAALSFEESSKPNQEEESKSLSWRIEKLPRGEPVGLAFQSWMGEGCPIHRGHI 92

Query: 312 FHAIXXXXXXXXXXXALEVMEWVIRERPYKLKELDYSYLLEFTFKFHGVWYGESLFSRIP 491
           FHAI           ALEVMEWV+RERPY+ KELDYSYLLEFT K HG+  GE LFS +P
Sbjct: 93  FHAINRLRKLKFNKRALEVMEWVVRERPYRPKELDYSYLLEFTTKLHGISQGEKLFSHVP 152

Query: 492 VEFQNDLLYNNLVIACLDQGRIRLSLAYMRKMREHGYPISHLVFNRLITLHSSPGRKKAI 671
           +EFQN+LLYNNLVIACLD+G IRLSLAYM+KMRE G+PIS+LVFNRLI LHSSP R+K I
Sbjct: 153 LEFQNELLYNNLVIACLDKGVIRLSLAYMKKMRELGHPISYLVFNRLIILHSSPHRRKII 212

Query: 672 PRILAQMKADKVAPHVSTYNILLKIEADGNNIESLTKVFGEMKRANVEPNEITYCILATA 851
           PRIL QMKADKVA HVSTYNIL+KIEA+ +NIE L KVFGEMK+  VEPNE++YC+LATA
Sbjct: 213 PRILTQMKADKVARHVSTYNILMKIEANEHNIEGLVKVFGEMKQQQVEPNEVSYCLLATA 272

Query: 852 HSVARLYSVAE 884
           H+VA+LY+VAE
Sbjct: 273 HAVAKLYTVAE 283


>ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial [Vitis vinifera]
          Length = 550

 Score =  334 bits (856), Expect = 2e-89
 Identities = 172/251 (68%), Positives = 198/251 (78%), Gaps = 7/251 (2%)
 Frame = +3

Query: 153 FNSF-TQRLTISSSESEPPH------CLSFRVEKLGREEAVTCAFQSWMGEGFPIHRGDI 311
           FN F T+   +S  ES  P+       LS+R+EKL R E V  AFQSWMGEG PIHRG I
Sbjct: 57  FNPFGTETAALSFEESSKPNQEEESKSLSWRIEKLPRGEPVGLAFQSWMGEGCPIHRGHI 116

Query: 312 FHAIXXXXXXXXXXXALEVMEWVIRERPYKLKELDYSYLLEFTFKFHGVWYGESLFSRIP 491
           FHAI           ALEVMEWV+RERPY+ KELDYSYLLEFT K HG+  GE LFS +P
Sbjct: 117 FHAINRLRKLKFNKRALEVMEWVVRERPYRPKELDYSYLLEFTTKLHGISQGEKLFSHVP 176

Query: 492 VEFQNDLLYNNLVIACLDQGRIRLSLAYMRKMREHGYPISHLVFNRLITLHSSPGRKKAI 671
           +EFQN+LLYNNLVIACLD+G IRLSLAYM+KMRE G+PIS+LVFNRLI LHSSP R+K I
Sbjct: 177 LEFQNELLYNNLVIACLDKGVIRLSLAYMKKMRELGHPISYLVFNRLIILHSSPHRRKII 236

Query: 672 PRILAQMKADKVAPHVSTYNILLKIEADGNNIESLTKVFGEMKRANVEPNEITYCILATA 851
           PRIL QMKADKVA HVSTYNIL+KIEA+ +NIE L KVFGEMK+  VEPNE++YC+LATA
Sbjct: 237 PRILTQMKADKVARHVSTYNILMKIEANEHNIEGLVKVFGEMKQQQVEPNEVSYCLLATA 296

Query: 852 HSVARLYSVAE 884
           H+VA+LY+VAE
Sbjct: 297 HAVAKLYTVAE 307


>ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial-like [Cucumis sativus]
           gi|449517541|ref|XP_004165804.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial-like [Cucumis sativus]
          Length = 527

 Score =  326 bits (835), Expect = 5e-87
 Identities = 167/278 (60%), Positives = 204/278 (73%)
 Frame = +3

Query: 51  SYYSLLPFFHKASTSFAQVMQRAKSLFLFSHRSLFNSFTQRLTISSSESEPPHCLSFRVE 230
           S Y L+  F +  +S    +      F F    +  + +    +  SE E P CLS R+E
Sbjct: 8   SGYRLIQAFRRTVSSTPSAVSTIPFRFNFLCTQIPGNLSPN--VLESELEEPKCLSLRIE 65

Query: 231 KLGREEAVTCAFQSWMGEGFPIHRGDIFHAIXXXXXXXXXXXALEVMEWVIRERPYKLKE 410
           ++ + E V  AF+SWMG+GFPIHRGDIFHAI           ALEVMEWVIRE+PY++ E
Sbjct: 66  RIPKGELVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKRALEVMEWVIREKPYRINE 125

Query: 411 LDYSYLLEFTFKFHGVWYGESLFSRIPVEFQNDLLYNNLVIACLDQGRIRLSLAYMRKMR 590
           LDYSYLLEFT K HG+  GE LFS IPVEFQ +LL+NNLVIACLD+G IRLSLAYMRKMR
Sbjct: 126 LDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMR 185

Query: 591 EHGYPISHLVFNRLITLHSSPGRKKAIPRILAQMKADKVAPHVSTYNILLKIEADGNNIE 770
           E G+ ISHLVFNRLI LHSS  R+K IP+IL+QMKADKV  HVSTYNIL+KIEA+ +NIE
Sbjct: 186 EVGHSISHLVFNRLIILHSSFRRRKIIPKILSQMKADKVPLHVSTYNILMKIEANEHNIE 245

Query: 771 SLTKVFGEMKRANVEPNEITYCILATAHSVARLYSVAE 884
            L +VF +M+RA VEPNE++YCI+ATAH+VA+LY+V E
Sbjct: 246 GLMRVFSDMRRAKVEPNEVSYCIVATAHAVAKLYTVVE 283