BLASTX nr result

ID: Coptis21_contig00029257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029257
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001030635.1| ankyrin repeat family protein [Arabidopsis t...    64   1e-08
ref|NP_187122.1| ankyrin repeat family protein [Arabidopsis thal...    64   1e-08
ref|NP_001189808.1| ankyrin repeat family protein [Arabidopsis t...    64   1e-08
gb|ACN40446.1| unknown [Picea sitchensis]                              63   3e-08
ref|XP_002531277.1| ankyrin repeat-containing protein, putative ...    60   2e-07

>ref|NP_001030635.1| ankyrin repeat family protein [Arabidopsis thaliana]
           gi|332640602|gb|AEE74123.1| ankyrin repeat family
           protein [Arabidopsis thaliana]
          Length = 455

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = +2

Query: 74  ASSSSGRIERTRRVIGAAVAGNLRDLKKAVAELGDYEGKELGKRVVKVKDDNGINALHFA 253
           AS++    E+ ++++ AA  GNL  LK    +L   EGK+L K V  +KD N   ALHFA
Sbjct: 5   ASTALAAREKVQQILNAACTGNLEFLKNVAKQLD--EGKDLTKTVESIKDANKRGALHFA 62

Query: 254 AEEGKFIICKYLIDELE 304
           A EG+  IC+YL++EL+
Sbjct: 63  AREGQTEICRYLLEELK 79


>ref|NP_187122.1| ankyrin repeat family protein [Arabidopsis thaliana]
           gi|6175185|gb|AAF04911.1|AC011437_26 ankyrin-like
           protein [Arabidopsis thaliana]
           gi|21536583|gb|AAM60915.1| ankyrin-like protein
           [Arabidopsis thaliana] gi|22531046|gb|AAM97027.1|
           ankyrin-like protein [Arabidopsis thaliana]
           gi|23197986|gb|AAN15520.1| ankyrin-like protein
           [Arabidopsis thaliana] gi|51969096|dbj|BAD43240.1|
           ankyrin-like protein [Arabidopsis thaliana]
           gi|332640601|gb|AEE74122.1| ankyrin repeat family
           protein [Arabidopsis thaliana]
          Length = 456

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = +2

Query: 74  ASSSSGRIERTRRVIGAAVAGNLRDLKKAVAELGDYEGKELGKRVVKVKDDNGINALHFA 253
           AS++    E+ ++++ AA  GNL  LK    +L   EGK+L K V  +KD N   ALHFA
Sbjct: 5   ASTALAAREKVQQILNAACTGNLEFLKNVAKQLD--EGKDLTKTVESIKDANKRGALHFA 62

Query: 254 AEEGKFIICKYLIDELE 304
           A EG+  IC+YL++EL+
Sbjct: 63  AREGQTEICRYLLEELK 79


>ref|NP_001189808.1| ankyrin repeat family protein [Arabidopsis thaliana]
           gi|332640603|gb|AEE74124.1| ankyrin repeat family
           protein [Arabidopsis thaliana]
          Length = 680

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = +2

Query: 74  ASSSSGRIERTRRVIGAAVAGNLRDLKKAVAELGDYEGKELGKRVVKVKDDNGINALHFA 253
           AS++    E+ ++++ AA  GNL  LK    +L   EGK+L K V  +KD N   ALHFA
Sbjct: 229 ASTALAAREKVQQILNAACTGNLEFLKNVAKQLD--EGKDLTKTVESIKDANKRGALHFA 286

Query: 254 AEEGKFIICKYLIDELE 304
           A EG+  IC+YL++EL+
Sbjct: 287 AREGQTEICRYLLEELK 303


>gb|ACN40446.1| unknown [Picea sitchensis]
          Length = 460

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/68 (45%), Positives = 45/68 (66%)
 Frame = +2

Query: 98  ERTRRVIGAAVAGNLRDLKKAVAELGDYEGKELGKRVVKVKDDNGINALHFAAEEGKFII 277
           ++   ++ AA  GNL  LKKA   +GD  G++L + +  VKD NG  ALHFAA +G+  I
Sbjct: 18  DKVNTLLNAARDGNLERLKKAAQAIGD--GQDLAETIAAVKDANGRGALHFAARDGRTEI 75

Query: 278 CKYLIDEL 301
           CKYL+++L
Sbjct: 76  CKYLLEDL 83


>ref|XP_002531277.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223529110|gb|EEF31090.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 463

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/77 (42%), Positives = 46/77 (59%)
 Frame = +2

Query: 74  ASSSSGRIERTRRVIGAAVAGNLRDLKKAVAELGDYEGKELGKRVVKVKDDNGINALHFA 253
           AS +    ++ +  + AA  GNL  LK   A+L D  GK + K V  +KD N   ALHFA
Sbjct: 5   ASDALAVRQKVQNFLTAACTGNLDLLKNIAAQLDD--GKGMAKTVADIKDANKRGALHFA 62

Query: 254 AEEGKFIICKYLIDELE 304
           A EGK  +CKYL+++L+
Sbjct: 63  AREGKTEVCKYLLEDLK 79


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