BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029254
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]   171   8e-41
ref|XP_002513610.1| pentatricopeptide repeat-containing protein,...   170   1e-40
ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat...   168   4e-40
ref|XP_002330010.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat...   164   9e-39

>emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  171 bits (432), Expect = 8e-41
 Identities = 81/96 (84%), Positives = 87/96 (90%)
 Frame = -1

Query: 288  LDVLVSKMKEAGYVPETNSALHDVEEEDKECHLAVHSEKLAIVFVIINTEPGTPIRITKN 109
            LDVLV KMKEAGYVPET+SALHDVEEEDKECHLAVHSEKLAI F I+NT PG+PIRITKN
Sbjct: 1564 LDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKN 1623

Query: 108  LRVCGDCHVAAKHISKITEREIIVRDTNRFHHFSDG 1
            LRVCGDCH+AAK ISKI  REI +RDTNRFHHF +G
Sbjct: 1624 LRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNG 1659


>ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547518|gb|EEF49013.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 660

 Score =  170 bits (430), Expect = 1e-40
 Identities = 80/96 (83%), Positives = 88/96 (91%)
 Frame = -1

Query: 288 LDVLVSKMKEAGYVPETNSALHDVEEEDKECHLAVHSEKLAIVFVIINTEPGTPIRITKN 109
           LDVLV KMKE GY+PET+SALHDVEEEDKE HLAVHSEKLA+ F IINT+PGTPIR+TKN
Sbjct: 557 LDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKN 616

Query: 108 LRVCGDCHVAAKHISKITEREIIVRDTNRFHHFSDG 1
           LRVCGDCHVAAK ISKI EREII+RDT+RFHHF +G
Sbjct: 617 LRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEG 652


>ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  168 bits (426), Expect = 4e-40
 Identities = 80/96 (83%), Positives = 86/96 (89%)
 Frame = -1

Query: 288 LDVLVSKMKEAGYVPETNSALHDVEEEDKECHLAVHSEKLAIVFVIINTEPGTPIRITKN 109
           LDV V KMKEAGYVPET+SALHDVEEEDKECHLAVHSEKLAI F I+NT PG+PIRITKN
Sbjct: 575 LDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKN 634

Query: 108 LRVCGDCHVAAKHISKITEREIIVRDTNRFHHFSDG 1
           LRVCGDCH+AAK ISKI  REI +RDTNRFHHF +G
Sbjct: 635 LRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNG 670


>ref|XP_002330010.1| predicted protein [Populus trichocarpa] gi|222871435|gb|EEF08566.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/96 (81%), Positives = 87/96 (90%)
 Frame = -1

Query: 288 LDVLVSKMKEAGYVPETNSALHDVEEEDKECHLAVHSEKLAIVFVIINTEPGTPIRITKN 109
           L VLV +MKE GY+PET+SALHDVEEEDKECHLAVHSEKLAIVF I+NT+PG+ IRITKN
Sbjct: 574 LGVLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKN 633

Query: 108 LRVCGDCHVAAKHISKITEREIIVRDTNRFHHFSDG 1
           +RVCGDCHVA K ISKI EREII+RDT+RFHHF DG
Sbjct: 634 IRVCGDCHVATKLISKIAEREIIIRDTHRFHHFRDG 669


>ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  164 bits (414), Expect = 9e-39
 Identities = 77/96 (80%), Positives = 84/96 (87%)
 Frame = -1

Query: 288 LDVLVSKMKEAGYVPETNSALHDVEEEDKECHLAVHSEKLAIVFVIINTEPGTPIRITKN 109
           LDVLV KMKE GY+P+T SALHDVE EDKECHLA+HSEKLAIVF I+NT+ GTPIRITKN
Sbjct: 575 LDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKN 634

Query: 108 LRVCGDCHVAAKHISKITEREIIVRDTNRFHHFSDG 1
           LRVCGDCH+A K ISKI  R IIVRD NRFHHFS+G
Sbjct: 635 LRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNG 670