BLASTX nr result

ID: Coptis21_contig00029220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029220
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273660.1| PREDICTED: trigger factor-like [Vitis vinifera]    63   2e-08
gb|AEC10971.1| hypothetical protein [Camellia sinensis]                61   1e-07
ref|XP_002530570.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
emb|CBI24665.3| unnamed protein product [Vitis vinifera]               59   3e-07
ref|XP_004140596.1| PREDICTED: trigger factor-like [Cucumis sati...    58   9e-07

>ref|XP_002273660.1| PREDICTED: trigger factor-like [Vitis vinifera]
          Length = 212

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
 Frame = -3

Query: 223 SLSCRGNYRALISTCVVTSGLKQVGTNAAPMEDISVVLSTVESGK-IKIKVDVSGAKSEA 47
           SLS R  ++   + C V+SG+K  G +++  ED SV  ++  + K +KI V++SG K+  
Sbjct: 50  SLSYRAIHKYCPAVCAVSSGVKDPGVSSSQFEDFSVTATSTGNAKELKISVELSGVKTRT 109

Query: 46  IFEDVFSKMVAAAQP 2
           IF++VFSKMVA AQP
Sbjct: 110 IFDNVFSKMVADAQP 124


>gb|AEC10971.1| hypothetical protein [Camellia sinensis]
          Length = 209

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 14/108 (12%)
 Frame = -3

Query: 283 SQLTSHQQSVGIYIPTQS-------------VISLSCRGNYRALISTCVVTSGLKQVGTN 143
           S++   +Q+V + IP  S              I    R   + L++ C V+SG++     
Sbjct: 14  SKIIRPKQNVDVLIPNLSSKRESFPLQMRYNAIKFRERACTKNLLAVCAVSSGVEDNEVL 73

Query: 142 AAPMEDISVVLS-TVESGKIKIKVDVSGAKSEAIFEDVFSKMVAAAQP 2
           ++  +D SV  S T ++ ++KI V+VSG K+++IF+DVFSKMVA AQP
Sbjct: 74  SSQFQDFSVAASGTSKASELKISVEVSGTKTQSIFDDVFSKMVADAQP 121


>ref|XP_002530570.1| conserved hypothetical protein [Ricinus communis]
           gi|223529869|gb|EEF31800.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 187

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
 Frame = -3

Query: 334 MPTTTTTCLRMPQFIRVSQLTSHQQSVGIYIPTQSVISLSCRGNYRALISTCVVTSGLKQ 155
           MP+  T     P    + Q T          P + ++      N+R L   C V S ++ 
Sbjct: 1   MPSLRTLLASPPHLFLIEQET----------PLKDIVE-----NHRCLTPVCAVLSDMQD 45

Query: 154 VGTNAAP--MEDISVVLS-TVESGKIKIKVDVSGAKSEAIFEDVFSKMVAAAQP 2
           +G  A+    E  SV+ S T E  +++I V+VSG K+ AIF++VF KMVAAAQP
Sbjct: 46  IGVGASSSQFEQFSVMASSTNEPRELRISVEVSGVKTRAIFDNVFEKMVAAAQP 99


>emb|CBI24665.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = -3

Query: 187 STCVVTSGLKQVGTNAAPMEDISVVLSTVESGK-IKIKVDVSGAKSEAIFEDVFSKMVAA 11
           + C V+SG+K  G +++  ED SV  ++  + K +KI V++SG K+  IF++VFSKMVA 
Sbjct: 56  AVCAVSSGVKDPGVSSSQFEDFSVTATSTGNAKELKISVELSGVKTRTIFDNVFSKMVAD 115

Query: 10  AQP 2
           AQP
Sbjct: 116 AQP 118


>ref|XP_004140596.1| PREDICTED: trigger factor-like [Cucumis sativus]
           gi|449487315|ref|XP_004157566.1| PREDICTED: trigger
           factor-like [Cucumis sativus]
          Length = 208

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
 Frame = -3

Query: 274 TSHQQSVGIYIPTQ---SVISLSCRGNYRALISTCVVTSGLKQVGTNAAPMEDISV--VL 110
           T +   +G+  P+Q       +S   N R L + C V S  + V  +++  ED SV  V 
Sbjct: 27  TPNLTCIGVSFPSQIRYGSRKISLSKNNRYLPAACAVLS--ENVSVSSSQFEDFSVTNVT 84

Query: 109 STVESGKIKIKVDVSGAKSEAIFEDVFSKMVAAAQP 2
           +T E+ ++KI+V+VSGAK+ AIF  VF +MVA AQP
Sbjct: 85  NTKENKELKIRVEVSGAKTRAIFNVVFDRMVAEAQP 120


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