BLASTX nr result

ID: Coptis21_contig00029219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029219
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278523.1| PREDICTED: uncharacterized protein LOC100260...   141   3e-31
emb|CBI26620.3| unnamed protein product [Vitis vinifera]              135   2e-29
ref|XP_003545131.1| PREDICTED: uncharacterized protein LOC100797...   127   5e-27
gb|AAM65331.1| unknown [Arabidopsis thaliana]                         121   2e-25
ref|XP_002864362.1| DTW domain-containing protein [Arabidopsis l...   119   1e-24

>ref|XP_002278523.1| PREDICTED: uncharacterized protein LOC100260565 [Vitis vinifera]
          Length = 421

 Score =  141 bits (355), Expect = 3e-31
 Identities = 105/306 (34%), Positives = 147/306 (48%), Gaps = 17/306 (5%)
 Frame = -2

Query: 867 TPLTKKRPICPSCAKPIRVCLCSRFKSPVYDNPIAVTVLQHDHEKNHPLNSTRIVRLGLK 688
           T    KRPICPSC+KP R CLCSR      +N + VT+LQH  E+ HPLNSTRI  LGLK
Sbjct: 3   TQTNSKRPICPSCSKPARTCLCSRIPIRGLENKVGVTILQHSLERKHPLNSTRIATLGLK 62

Query: 687 NVNIATCSDVHFEAKFLIKLLTLGSVGERSNDKNELVDIGCNGVPQEPIFESDAG----- 523
           N+ +A+ SDV+FEA+F I+LL LG              +G NG+ +   F+  +G     
Sbjct: 63  NLTVASVSDVNFEAQFEIRLLELG--------------LGRNGL-ESLDFDQGSGYRETL 107

Query: 522 NACDEYVTHVDISRNNEKILDFEPSQGFGEKKKAGVNTTDGFVNDVVDENNGKNCVRIPV 343
               E V  V+      +++D           K  +N  + + N    +N+  +      
Sbjct: 108 KLGFENVNGVNSVEKRPQVIDTSVGWSLEMDHKGVLNGENPWENREFMQNSSLSLSSDAS 167

Query: 342 SFGGDDPVVDKERRGESGYADLGSALTTMQTISDTNEAIVM-----KPIGEEQYD--ISA 184
               D     KE  G    A+L   L     +S  N+ + +     + +  E+ D  I+A
Sbjct: 168 VAETDYEFTVKECIGGKRRANLDVGLDDKTEVSHENKLLKLDCNPIETVAREKEDCVITA 227

Query: 183 TITKCGFTCSLMSIRTLGKSSEKPNFDQLLASQIAQDVISNGFVVKRFLKNQLD-----G 19
           TI K G   SL  I       +KPNFD +LAS +A D ++ GFVVK+  K Q+       
Sbjct: 228 TIGKYGLISSLTHIWMSQTHLQKPNFDHILASPVALDDLAKGFVVKKLQKRQVTEGQEFE 287

Query: 18  EYEENE 1
           EYEE E
Sbjct: 288 EYEEYE 293


>emb|CBI26620.3| unnamed protein product [Vitis vinifera]
          Length = 453

 Score =  135 bits (339), Expect = 2e-29
 Identities = 106/306 (34%), Positives = 139/306 (45%), Gaps = 2/306 (0%)
 Frame = -2

Query: 948 IHTLSFTQRKRFYLCCGNFGLEMGTVETPLTKKRPICPSCAKPIRVCLCSRFKSPVYDNP 769
           IHTLS T +           L+M T       KRPICPSC+KP R CLCSR      +N 
Sbjct: 53  IHTLSQTSQ--------TLALQMAT---QTNSKRPICPSCSKPARTCLCSRIPIRGLENK 101

Query: 768 IAVTVLQHDHEKNHPLNSTRIVRLGLKNVNIATCSDVHFEAKFLIKLLTLGSVGERSNDK 589
           + VT+LQH  E+ HPLNSTRI  LGLKN+ +A+ SDV+FEA+F I+LL LG         
Sbjct: 102 VGVTILQHSLERKHPLNSTRIATLGLKNLTVASVSDVNFEAQFEIRLLELG--------- 152

Query: 588 NELVDIGCNGVPQEPIFESDAGNACDEYVTHVDISRNNEKILDFEPSQGFGEKKKAGVNT 409
                                            + RN  + LDF+   G+ E  K G   
Sbjct: 153 ---------------------------------LGRNGLESLDFDQGSGYRETLKLGFEN 179

Query: 408 TDGFVNDVVDENNGKNCVRIPVSFGGDDPVVDKERRGESGYADLGSALTTMQTISDTNEA 229
            +G VN V      K    I  S G     ++ + +G    +     L       D N  
Sbjct: 180 VNG-VNSV-----EKRPQVIDTSVGWS---LEMDHKGVLNVSHENKLLKL-----DCNP- 224

Query: 228 IVMKPIGEEQYD--ISATITKCGFTCSLMSIRTLGKSSEKPNFDQLLASQIAQDVISNGF 55
             ++ +  E+ D  I+ATI K G   SL  I       +KPNFD +LAS +A D ++ GF
Sbjct: 225 --IETVAREKEDCVITATIGKYGLISSLTHIWMSQTHLQKPNFDHILASPVALDDLAKGF 282

Query: 54  VVKRFL 37
           VVK  L
Sbjct: 283 VVKNVL 288


>ref|XP_003545131.1| PREDICTED: uncharacterized protein LOC100797499 [Glycine max]
          Length = 423

 Score =  127 bits (318), Expect = 5e-27
 Identities = 100/294 (34%), Positives = 140/294 (47%), Gaps = 10/294 (3%)
 Frame = -2

Query: 852 KRPICPSCAKPIRVCLCSRFKSPVYDNPIAVTVLQHDHEKNHPLNSTRIVRLGLKNVNIA 673
           KRPICPSC+KP R CLCSR  +P   N + VT+LQH  E+ HPLNSTRI  LGLKN+ +A
Sbjct: 44  KRPICPSCSKPSRTCLCSRILTPGLQNSVHVTILQHSLERKHPLNSTRIAILGLKNLTVA 103

Query: 672 TCSDVHFEAKFLIKLLTLG-SVGERSNDKNELVDIGCNGVPQEPIFESDAGNACDEYVTH 496
           T SDV+FEA+FLI+LL      G   N+   L    C  +                  T 
Sbjct: 104 TVSDVNFEARFLIRLLDPNYHSGHAGNEPTALFSRQCWEIGD----------------TQ 147

Query: 495 VDISRNNEKILDFEPSQGFGEKKKAGVNTTDGFVNDVVDE-NNGKNCVRIPVSFGG--DD 325
             +S  +  ++D + +   G +   G         DV+D  +N +   ++ +S G   DD
Sbjct: 148 KLLSEKDSNLIDTDSAGKCGLRNDVG---------DVLDSASNAEVVKQVSISDGAVMDD 198

Query: 324 PVVDKERRGESGYADLGSALTTMQTISDTNEAIVMKPIGEEQYDISATIT--KCGFTCSL 151
            V   E+   S   DL                   + + EE  +++ T+T  K G   SL
Sbjct: 199 EV---EKNAISPKCDLA------------------RGVHEESGELAVTVTIGKYGAISSL 237

Query: 150 MSIRTLGKSSEKP--NFDQLLASQIAQDVISNGFVVKRFLKNQL--DGEYEENE 1
             I       + P  +FD +LA   A + +S GF+VK+F + QL  D E EE E
Sbjct: 238 SHIWMTQAQCQSPELSFDNILAYPEACEALSKGFLVKKFQRKQLNRDEELEECE 291


>gb|AAM65331.1| unknown [Arabidopsis thaliana]
          Length = 354

 Score =  121 bits (304), Expect = 2e-25
 Identities = 87/288 (30%), Positives = 135/288 (46%), Gaps = 4/288 (1%)
 Frame = -2

Query: 861 LTKKRPICPSCAKPIRVCLCSRFKSPVYDNPIAVTVLQHDHEKNHPLNSTRIVRLGLKNV 682
           +  KRP CPSC KP ++CLC + +SP +DN +++T+LQH  E+ H LNSTRI RLGLKNV
Sbjct: 1   MVTKRPTCPSCDKPSQLCLCKKMRSPCFDNQVSITILQHSLERKHALNSTRIARLGLKNV 60

Query: 681 NIATCSDVHFEAKFLIKLLTLGSVGERSNDKNELVDIGCNGVPQEPIFESDAGNACDEYV 502
            + T  DVH EA+FLI+++                                 G+ C +  
Sbjct: 61  GVTTVFDVHDEAEFLIRVI---------------------------------GSGCSKID 87

Query: 501 T-HVDISRNNEKILDFEPSQGFGEKKKAGVNTTDGFVNDVVDENNGKNCVRIPVSFGGDD 325
           T H+D     E +   E    F    K G   + G V ++  E   KN V +        
Sbjct: 88  TNHLDSEYRVENVASLELDDSF----KLG---SSGNVENLESE---KNVVLV-------- 129

Query: 324 PVVDKERRGESGYADLGSALTTMQTISDTN--EAIVMKPIGEEQYD-ISATITKCGFTCS 154
                    + G  ++  +L   Q +S+ +  ++ V   IG  + D I   + K G   +
Sbjct: 130 ---------DHGSLEIAESLNLSQHLSEISYRDSRVRDKIGSYEEDLIKICMKKHGVISN 180

Query: 153 LMSIRTLGKSSEKPNFDQLLASQIAQDVISNGFVVKRFLKNQLDGEYE 10
           +     L  + + P+FD +LAS  A DV++ GF+V +F + + + E E
Sbjct: 181 VSHSLMLETNVKVPSFDHILASPAAMDVLAKGFMVTKFSEGKQEFELE 228


>ref|XP_002864362.1| DTW domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310197|gb|EFH40621.1| DTW domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 402

 Score =  119 bits (297), Expect = 1e-24
 Identities = 97/323 (30%), Positives = 142/323 (43%), Gaps = 6/323 (1%)
 Frame = -2

Query: 960 GAQFIHTLSFTQ----RKRFYLCCGNFGLEMGTVETPLTKKRPICPSCAKPIRVCLCSRF 793
           G    H ++ TQ    R  F  C    G+ +    T  TK+RP CPSC KP ++CLC + 
Sbjct: 8   GQMMGHVVARTQMILSRSNFADCIRCQGVRVSKTLTMGTKRRPTCPSCDKPSQLCLCKKM 67

Query: 792 KSPVYDNPIAVTVLQHDHEKNHPLNSTRIVRLGLKNVNIATCSDVHFEAKFLIKLLTLGS 613
           +SP +DN ++VT+LQH  E+ H LNSTRI RLGLKNV + T  DVH EA+F+I+++    
Sbjct: 68  RSPCFDNQVSVTILQHSLERKHALNSTRIARLGLKNVGVTTVFDVHDEAEFVIRVI---- 123

Query: 612 VGERSNDKNELVDIGCNGVPQEPIFESDAGNACDEYVTH-VDISRNNEKILDFEPSQGFG 436
                                        G+ C +  T+  D     E +   E  + F 
Sbjct: 124 -----------------------------GSGCSKIGTNQSDFDYRLENVASLELDESF- 153

Query: 435 EKKKAGVNTTDGFVNDVVDENNGKNCVRIP-VSFGGDDPVVDKERRGESGYADLGSALTT 259
              K G+N   G V ++  E   KN V +   S    + +   +  GE    D    L  
Sbjct: 154 ---KLGIN---GNVENLESE---KNVVLVAHRSLKIAESLKLSQHSGEMSCRD----LRV 200

Query: 258 MQTISDTNEAIVMKPIGEEQYDISATITKCGFTCSLMSIRTLGKSSEKPNFDQLLASQIA 79
              I    E+         +  I   + K G   ++     L  S E  +FD +L S  A
Sbjct: 201 TDKIGSCEES-------RSEDLIRICMKKQGVISNVSHSLMLETSVEDSSFDHILGSPAA 253

Query: 78  QDVISNGFVVKRFLKNQLDGEYE 10
            DV++ GFVV +F + + + E E
Sbjct: 254 MDVLAKGFVVTKFSEGKREFELE 276


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