BLASTX nr result

ID: Coptis21_contig00029212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029212
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306599.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38
ref|XP_002302266.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38
ref|XP_002285822.1| PREDICTED: uncharacterized protein LOC100245...   155   2e-36
ref|XP_004169470.1| PREDICTED: uncharacterized LOC101222277 [Cuc...   148   4e-34
ref|XP_004151123.1| PREDICTED: uncharacterized protein LOC101222...   148   4e-34

>ref|XP_002306599.1| predicted protein [Populus trichocarpa] gi|222856048|gb|EEE93595.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/108 (75%), Positives = 92/108 (85%), Gaps = 1/108 (0%)
 Frame = -3

Query: 455 FMVSTSRLQQRVAAEINRIDGRPGTLLYEFKRVKSAMEELRAELERTCSSQGSTEFEDE- 279
           F++ST RLQQRVAAEIN+I+GRPG LLYEF+R K AMEELR ELER C   G+ E+E E 
Sbjct: 215 FLISTGRLQQRVAAEINQINGRPGILLYEFRRSKMAMEELRGELERKCGQGGAVEWETEV 274

Query: 278 GIRERIDNLKNYFGVLKSGTESIVGQLDDFFDEIVEGRKKLLDICSHR 135
           GIRER+DNL+  FGVL+SG E+IVGQLDDFFDEIVEGRKKLLD CSHR
Sbjct: 275 GIRERVDNLRGCFGVLRSGAENIVGQLDDFFDEIVEGRKKLLDFCSHR 322


>ref|XP_002302266.1| predicted protein [Populus trichocarpa] gi|222843992|gb|EEE81539.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  162 bits (411), Expect = 2e-38
 Identities = 80/108 (74%), Positives = 92/108 (85%), Gaps = 1/108 (0%)
 Frame = -3

Query: 455 FMVSTSRLQQRVAAEINRIDGRPGTLLYEFKRVKSAMEELRAELERTCSSQGSTEFEDE- 279
           FM+ST RLQQRVAAEIN+I+GRPG LLYEF+R K AMEELR ELER C   G+ E+E E 
Sbjct: 215 FMISTGRLQQRVAAEINQINGRPGILLYEFRRSKMAMEELRGELERKCGQGGAVEWETEV 274

Query: 278 GIRERIDNLKNYFGVLKSGTESIVGQLDDFFDEIVEGRKKLLDICSHR 135
           G+RER+DNL+  FGVL+SG E+I+GQLDDFFDEIVEGRKKLLD CSHR
Sbjct: 275 GMRERVDNLRGCFGVLRSGAENIIGQLDDFFDEIVEGRKKLLDFCSHR 322


>ref|XP_002285822.1| PREDICTED: uncharacterized protein LOC100245399 [Vitis vinifera]
           gi|302141891|emb|CBI19094.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/108 (73%), Positives = 93/108 (86%), Gaps = 1/108 (0%)
 Frame = -3

Query: 455 FMVSTSRLQQRVAAEINRIDGRPGTLLYEFKRVKSAMEELRAELERTCSSQGSTEFEDE- 279
           FM+ST+RLQQRVAAEIN+I+GRPG LLYEF+R K AM+ELR ELER CS QG  ++E E 
Sbjct: 215 FMISTARLQQRVAAEINQINGRPGILLYEFRRSKVAMDELRGELERRCS-QGVLDWESEV 273

Query: 278 GIRERIDNLKNYFGVLKSGTESIVGQLDDFFDEIVEGRKKLLDICSHR 135
           GI ER++NL+  FGVL+SG E+I+GQLDDFFDEIVEGRKKLLD CSHR
Sbjct: 274 GIGERVENLRGCFGVLRSGAENIIGQLDDFFDEIVEGRKKLLDFCSHR 321


>ref|XP_004169470.1| PREDICTED: uncharacterized LOC101222277 [Cucumis sativus]
          Length = 324

 Score =  148 bits (374), Expect = 4e-34
 Identities = 78/110 (70%), Positives = 91/110 (82%), Gaps = 3/110 (2%)
 Frame = -3

Query: 455 FMVSTSRLQQRVAAEINRIDGRPGTLLYEFKRVKSAMEELRAELERTCS--SQGSTEFED 282
           FM+ST+RLQ+RVA EIN+++GRPG LLYEF+R K AMEELRAELER     SQG  E+E 
Sbjct: 215 FMISTARLQERVAGEINQMNGRPGILLYEFRRSKMAMEELRAELERRVGMGSQGLVEWET 274

Query: 281 E-GIRERIDNLKNYFGVLKSGTESIVGQLDDFFDEIVEGRKKLLDICSHR 135
           E GIRER++NL+  FGVL+SG E+IV QLDDF DEIVEGRKKLLD CSHR
Sbjct: 275 EIGIRERVENLRACFGVLRSGAENIVCQLDDFIDEIVEGRKKLLDFCSHR 324


>ref|XP_004151123.1| PREDICTED: uncharacterized protein LOC101222277 [Cucumis sativus]
          Length = 267

 Score =  148 bits (374), Expect = 4e-34
 Identities = 78/110 (70%), Positives = 91/110 (82%), Gaps = 3/110 (2%)
 Frame = -3

Query: 455 FMVSTSRLQQRVAAEINRIDGRPGTLLYEFKRVKSAMEELRAELERTCS--SQGSTEFED 282
           FM+ST+RLQ+RVA EIN+++GRPG LLYEF+R K AMEELRAELER     SQG  E+E 
Sbjct: 158 FMISTARLQERVAGEINQMNGRPGILLYEFRRSKMAMEELRAELERRVGMGSQGLVEWET 217

Query: 281 E-GIRERIDNLKNYFGVLKSGTESIVGQLDDFFDEIVEGRKKLLDICSHR 135
           E GIRER++NL+  FGVL+SG E+IV QLDDF DEIVEGRKKLLD CSHR
Sbjct: 218 EIGIRERVENLRACFGVLRSGAENIVCQLDDFIDEIVEGRKKLLDFCSHR 267


Top