BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029211
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]   138   5e-31
ref|XP_002326871.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-19
gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arab...    97   1e-18
ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Ar...    97   1e-18

>emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
          Length = 751

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/127 (53%), Positives = 86/127 (67%), Gaps = 4/127 (3%)
 Frame = +1

Query: 1   QHSSWSSIERKCLSLLQKPNTKNTIPQIHSFILRNGIENNVNVFTKFISACCSV----PT 168
           Q S WS IERKCLSLLQ+  T+  + QIH+F+LRN +E N N+FTKFI+ C S+    P 
Sbjct: 144 QQSLWSPIERKCLSLLQQSKTRANLLQIHAFMLRNALETNPNLFTKFIATCSSIALLAPL 203

Query: 169 TASFSGVRYARRVFDQRTERDDTYLCNCMIKGYVDDYLFKESMTLYRDLKRGTCFSPDNF 348
               +G+ +ARR+FD R  RDD +LCN MIK YV    + ES  LYRDL+R T F+PD+F
Sbjct: 204 YDPLAGIVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSF 263

Query: 349 TFPSLLK 369
           TF  L K
Sbjct: 264 TFSVLAK 270


>ref|XP_002326871.1| predicted protein [Populus trichocarpa] gi|222835186|gb|EEE73621.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/116 (50%), Positives = 77/116 (66%)
 Frame = +1

Query: 22  IERKCLSLLQKPNTKNTIPQIHSFILRNGIENNVNVFTKFISACCSVPTTASFSGVRYAR 201
           +ER+CL LLQ+  T+ T+ QIH+ ILRN I+ NVN+ TKFI+ C         S  R+AR
Sbjct: 1   MERECLFLLQRCRTRKTLLQIHALILRNAIDANVNILTKFITTC------GQLSSTRHAR 54

Query: 202 RVFDQRTERDDTYLCNCMIKGYVDDYLFKESMTLYRDLKRGTCFSPDNFTFPSLLK 369
            +FD R+ R DT+LCN MIK +V      ++ TLY+DL+R TCF PDNFTF  L K
Sbjct: 55  HLFDNRSHRGDTFLCNSMIKSHVVMRQLADAFTLYKDLRRETCFVPDNFTFTVLAK 110


>ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
           [Vitis vinifera] gi|297734603|emb|CBI16654.3| unnamed
           protein product [Vitis vinifera]
          Length = 577

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/96 (51%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
 Frame = +1

Query: 94  ILRNGIENNVNVFTKFISACCSV----PTTASFSGVRYARRVFDQRTERDDTYLCNCMIK 261
           +LRN +E N N+FTKFI+ C S+    P     +G+ +ARR+FD R  RDD +LCN MIK
Sbjct: 1   MLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVHARRMFDHRPHRDDAFLCNSMIK 60

Query: 262 GYVDDYLFKESMTLYRDLKRGTCFSPDNFTFPSLLK 369
            YV    + ES  LYRDL+R T F+PD+FTF  L K
Sbjct: 61  AYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAK 96


>gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 555

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/92 (50%), Positives = 65/92 (70%)
 Frame = +1

Query: 94  ILRNGIENNVNVFTKFISACCSVPTTASFSGVRYARRVFDQRTERDDTYLCNCMIKGYVD 273
           +LR+ IE NV +FTKF+        +AS  G+ YAR++FDQR +RDD++L N MIK Y++
Sbjct: 1   MLRHAIETNVQIFTKFLVI------SASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLE 54

Query: 274 DYLFKESMTLYRDLKRGTCFSPDNFTFPSLLK 369
              + +S  LYRDL++ TCF+PDNFTF +L K
Sbjct: 55  TRQYPDSFALYRDLRKETCFAPDNFTFTTLTK 86


>ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g44880 gi|2344896|gb|AAC31836.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255385|gb|AEC10479.1|
           Pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 555

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/92 (50%), Positives = 65/92 (70%)
 Frame = +1

Query: 94  ILRNGIENNVNVFTKFISACCSVPTTASFSGVRYARRVFDQRTERDDTYLCNCMIKGYVD 273
           +LR+ IE NV +FTKF+        +AS  G+ YAR++FDQR +RDD++L N MIK Y++
Sbjct: 1   MLRHAIETNVQIFTKFLVI------SASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLE 54

Query: 274 DYLFKESMTLYRDLKRGTCFSPDNFTFPSLLK 369
              + +S  LYRDL++ TCF+PDNFTF +L K
Sbjct: 55  TRQYPDSFALYRDLRKETCFAPDNFTFTTLTK 86