BLASTX nr result

ID: Coptis21_contig00029209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029209
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447853.1| hypothetical protein SORBIDRAFT_06g016980 [S...    60   1e-07
tpg|DAA37756.1| TPA: hypothetical protein ZEAMMB73_165571 [Zea m...    60   2e-07
tpg|DAA37755.1| TPA: hypothetical protein ZEAMMB73_165571 [Zea m...    60   2e-07
ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinu...    60   2e-07
ref|XP_004146280.1| PREDICTED: ATP-dependent RNA helicase Dhx29-...    60   2e-07

>ref|XP_002447853.1| hypothetical protein SORBIDRAFT_06g016980 [Sorghum bicolor]
            gi|241939036|gb|EES12181.1| hypothetical protein
            SORBIDRAFT_06g016980 [Sorghum bicolor]
          Length = 1240

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = -2

Query: 433  ARQRRGRTGHVKPGICLCLYTHHRFDNLMHPYQ 335
            A+QRRGR G VKPG+C CLYT HRF+N+M P+Q
Sbjct: 991  AKQRRGRAGRVKPGLCFCLYTRHRFENIMRPFQ 1023


>tpg|DAA37756.1| TPA: hypothetical protein ZEAMMB73_165571 [Zea mays]
          Length = 1380

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = -2

Query: 433  ARQRRGRTGHVKPGICLCLYTHHRFDNLMHPYQ 335
            A+QRRGR G VKPG+C CLYT HRF+N+M P+Q
Sbjct: 985  AKQRRGRAGRVKPGLCFCLYTRHRFENVMRPFQ 1017


>tpg|DAA37755.1| TPA: hypothetical protein ZEAMMB73_165571 [Zea mays]
          Length = 1185

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = -2

Query: 433  ARQRRGRTGHVKPGICLCLYTHHRFDNLMHPYQ 335
            A+QRRGR G VKPG+C CLYT HRF+N+M P+Q
Sbjct: 985  AKQRRGRAGRVKPGLCFCLYTRHRFENVMRPFQ 1017


>ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223531539|gb|EEF33369.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1509

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/33 (78%), Positives = 26/33 (78%)
 Frame = -2

Query: 433  ARQRRGRTGHVKPGICLCLYTHHRFDNLMHPYQ 335
            ARQRRGR G VKPGIC CLYT HRF  LM PYQ
Sbjct: 1022 ARQRRGRAGRVKPGICFCLYTCHRFKKLMRPYQ 1054


>ref|XP_004146280.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Cucumis sativus]
          Length = 1642

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 23/33 (69%), Positives = 27/33 (81%)
 Frame = -2

Query: 433  ARQRRGRTGHVKPGICLCLYTHHRFDNLMHPYQ 335
            ARQRRGR G V+PG C CLYTHHR++ LM P+Q
Sbjct: 1207 ARQRRGRAGRVRPGTCFCLYTHHRYEKLMRPFQ 1239


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