BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029208
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    97   2e-18
ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago...    86   5e-15
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    83   3e-14
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    80   2e-13
ref|XP_003576632.1| PREDICTED: putative ribonuclease H protein A...    74   1e-11

>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
 Frame = -2

Query: 531 AYEEIRSKRNEVSWSKCVWNTYTHPRTSALAWKICQRGVPVDENIKKRGIHLASWCRLCN 352
           AY+ I    N V W K +WN+Y  P  S + W++    +P DEN++KRG  + S C  C 
Sbjct: 23  AYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRGCLIVSICCFCM 82

Query: 351 KAEETLNHLIWDCSFSGQIWSWL-RQKFKMRGLFNTLEDALKLSRCSSPLIKQLWNTAVI 175
           K+ E+  H+ ++C  + ++W WL +   K+    + L+  ++     S L+  + N+A+I
Sbjct: 83  KSAESSQHIFFECHVTSRLWDWLGKGTDKLLDCSSCLQLLIRNWGSGSKLVNNILNSAII 142

Query: 174 STITIIWKHRNKILFEDIKPSLIKCFQQIRSKVFCTSHLSKAHMNS 37
            TI  IW  RN+  F +   ++   F  I ++V  +  L     NS
Sbjct: 143 HTIWSIWIERNQRCFHNKHQAMTTLFNIILAEVKMSFSLCMIKGNS 188


>ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago truncatula]
           gi|355506897|gb|AES88039.1| Glycerol-3-phosphate
           dehydrogenase [Medicago truncatula]
          Length = 866

 Score = 85.5 bits (210), Expect = 5e-15
 Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 1/161 (0%)
 Frame = -2

Query: 516 RSKRNEVSWSKCVWNTYTHPRTSALAWKICQRGVPVDENIKKRGIHLASWCRLCNKAEET 337
           +SK+ E   +K +W+    P  S LAW++    +PVDE +K+RG  +   C LC  AEE+
Sbjct: 35  QSKQKEDELAKSIWSPNIPPSKSLLAWRLMNDKIPVDEKLKERGHVIPFICSLCMTAEES 94

Query: 336 LNHLIWDCSFSGQIWSWLRQKFKMRGLFNTLEDALKLS-RCSSPLIKQLWNTAVISTITI 160
             HL ++CS++  +W WL         F  LE+   LS R  SP       + VI+ ++ 
Sbjct: 95  SFHLFFECSYAVHLWCWLASILNQSLHFLALEEIWSLSARGWSPQFTLAITSTVINILSA 154

Query: 159 IWKHRNKILFEDIKPSLIKCFQQIRSKVFCTSHLSKAHMNS 37
           IW  RN   F++ K        QI   V  ++  SK   +S
Sbjct: 155 IWNARNTYRFKNRKIHWESVISQIIVNVSLSASNSKLSASS 195


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 1/148 (0%)
 Frame = -2

Query: 498 VSWSKCVWNTYTHPRTSALAWKICQRGVPVDENIKKRGIHLAS-WCRLCNKAEETLNHLI 322
           V W+K +WN YT P  + + W+     +P D+N++KRG ++ S  C  C K  ET +H+ 
Sbjct: 69  VHWAKMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIF 128

Query: 321 WDCSFSGQIWSWLRQKFKMRGLFNTLEDALKLSRCSSPLIKQLWNTAVISTITIIWKHRN 142
             C  + Q+W WL +       F+++   L +SR    +++ + N+A++  +  IW   N
Sbjct: 129 LQCPVTLQLWDWLLKATDQHLDFSSI---LNISR----MVQHVMNSAIVHIMWSIWLECN 181

Query: 141 KILFEDIKPSLIKCFQQIRSKVFCTSHL 58
              F+ ++  +   F  I ++V   S +
Sbjct: 182 NKYFDGVQKPMSTLFNTILAEVLRLSFM 209


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
 Frame = -2

Query: 504 NEVSWSKCVWNTYTHPRTSALAWKICQRGVPVDENIKKRGIHLASWCRLCNKAEETLNHL 325
           N  +W+K +W+    P  S L W++    VP DE +++RG  L S C LC    ET  HL
Sbjct: 108 NTHNWAKLIWSKDIPPSKSILTWRLIHDKVPTDEKLQQRGCQLPSMCSLCGTHVETSFHL 167

Query: 324 IWDCSFSGQIWSWLRQKFKMRGLFNTLEDALKL-SRCSSPLIKQLWNTAVISTITIIWKH 148
            ++C F+ +IW W          F ++ D   +  R  SP  K +    +++ I+ IW +
Sbjct: 168 FFECCFAFRIWCWFASVLDSSLHFQSIPDIWSVCDRGWSPQCKVVNQATIVNIISTIWYN 227

Query: 147 RNK 139
           RN+
Sbjct: 228 RNQ 230


>ref|XP_003576632.1| PREDICTED: putative ribonuclease H protein At1g65750-like
           [Brachypodium distachyon]
          Length = 475

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
 Frame = -2

Query: 486 KCVWNTYTHPRTSALAWKICQRGVPVDENIKKRGIHLASWCRLCNKAEETLNHLIWDCSF 307
           K  W ++  PR     W  CQ      E   + G+  AS C LC++  ET+NHL+ DC F
Sbjct: 336 KLNWKSWAPPRVKFFLWLACQDRCWTAERRARHGLAHASRCSLCDQTMETMNHLLVDCPF 395

Query: 306 SGQIW----SWLRQKFKMRGLFNTLEDALKLSRCSSPLIKQLWNTAVIS-TITIIWKHRN 142
           S  +W    SW+R          +  D  + S  S+P + +   +++I  T   IWKHRN
Sbjct: 396 SRSVWYEVLSWIRSTGAPPTTGVSFADWWQASVHSAPSVARKGTSSIIMLTAWWIWKHRN 455

Query: 141 KILFEDIKPSLIKCFQQIR 85
             +F++  P++     QI+
Sbjct: 456 AAVFDNATPNIGSLADQIK 474