BLASTX nr result

ID: Coptis21_contig00029194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029194
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139526.1| PREDICTED: ABC transporter I family member 2...   129   2e-28
ref|XP_003633613.1| PREDICTED: ABC transporter I family member 2...   127   9e-28
ref|XP_002281168.1| PREDICTED: ABC transporter I family member 2...   127   9e-28
emb|CAN66319.1| hypothetical protein VITISV_040623 [Vitis vinifera]   127   9e-28
ref|XP_002308160.1| ABC transporter family protein [Populus tric...   126   2e-27

>ref|XP_004139526.1| PREDICTED: ABC transporter I family member 20-like [Cucumis
           sativus] gi|449518083|ref|XP_004166073.1| PREDICTED: ABC
           transporter I family member 20-like [Cucumis sativus]
          Length = 326

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/69 (86%), Positives = 65/69 (94%)
 Frame = +2

Query: 173 ETTIVIDNLRFTYPGIDGHPPPGSTPLIDNFSLSLNAGERCLLVGSNGAGKTTILKILGG 352
           + TIVID LRFTYPGIDGHPP GS PLI+NFSL+LNAG+RCLLVGSNGAGKTTILKILGG
Sbjct: 5   DPTIVIDRLRFTYPGIDGHPPSGSKPLIENFSLTLNAGDRCLLVGSNGAGKTTILKILGG 64

Query: 353 KHMVDPHMV 379
           KHMV+PHMV
Sbjct: 65  KHMVEPHMV 73


>ref|XP_003633613.1| PREDICTED: ABC transporter I family member 20 isoform 2 [Vitis
           vinifera]
          Length = 343

 Score =  127 bits (319), Expect = 9e-28
 Identities = 58/67 (86%), Positives = 65/67 (97%)
 Frame = +2

Query: 179 TIVIDNLRFTYPGIDGHPPPGSTPLIDNFSLSLNAGERCLLVGSNGAGKTTILKILGGKH 358
           T+ I+NLRFTYPGIDG PPPGSTPLID+FSL+LN+G+RCLLVGSNGAGKTTILKILGGKH
Sbjct: 10  TVEINNLRFTYPGIDGQPPPGSTPLIDHFSLTLNSGDRCLLVGSNGAGKTTILKILGGKH 69

Query: 359 MVDPHMV 379
           MV+PHMV
Sbjct: 70  MVEPHMV 76


>ref|XP_002281168.1| PREDICTED: ABC transporter I family member 20 isoform 1 [Vitis
           vinifera] gi|296089817|emb|CBI39636.3| unnamed protein
           product [Vitis vinifera]
          Length = 329

 Score =  127 bits (319), Expect = 9e-28
 Identities = 58/67 (86%), Positives = 65/67 (97%)
 Frame = +2

Query: 179 TIVIDNLRFTYPGIDGHPPPGSTPLIDNFSLSLNAGERCLLVGSNGAGKTTILKILGGKH 358
           T+ I+NLRFTYPGIDG PPPGSTPLID+FSL+LN+G+RCLLVGSNGAGKTTILKILGGKH
Sbjct: 10  TVEINNLRFTYPGIDGQPPPGSTPLIDHFSLTLNSGDRCLLVGSNGAGKTTILKILGGKH 69

Query: 359 MVDPHMV 379
           MV+PHMV
Sbjct: 70  MVEPHMV 76


>emb|CAN66319.1| hypothetical protein VITISV_040623 [Vitis vinifera]
          Length = 329

 Score =  127 bits (319), Expect = 9e-28
 Identities = 58/67 (86%), Positives = 65/67 (97%)
 Frame = +2

Query: 179 TIVIDNLRFTYPGIDGHPPPGSTPLIDNFSLSLNAGERCLLVGSNGAGKTTILKILGGKH 358
           T+ I+NLRFTYPGIDG PPPGSTPLID+FSL+LN+G+RCLLVGSNGAGKTTILKILGGKH
Sbjct: 10  TVEINNLRFTYPGIDGQPPPGSTPLIDHFSLTLNSGDRCLLVGSNGAGKTTILKILGGKH 69

Query: 359 MVDPHMV 379
           MV+PHMV
Sbjct: 70  MVEPHMV 76


>ref|XP_002308160.1| ABC transporter family protein [Populus trichocarpa]
           gi|222854136|gb|EEE91683.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 325

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/69 (85%), Positives = 64/69 (92%)
 Frame = +2

Query: 173 ETTIVIDNLRFTYPGIDGHPPPGSTPLIDNFSLSLNAGERCLLVGSNGAGKTTILKILGG 352
           E TIVI+ LRFTYPGIDGHPPPGS PLID FSL+LN+G+RCLLVGSNGAGKTTILKILGG
Sbjct: 5   EPTIVINGLRFTYPGIDGHPPPGSKPLIDEFSLNLNSGDRCLLVGSNGAGKTTILKILGG 64

Query: 353 KHMVDPHMV 379
           KHMV+P MV
Sbjct: 65  KHMVEPQMV 73


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