BLASTX nr result

ID: Coptis21_contig00029189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029189
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152566.1| PREDICTED: uncharacterized protein LOC101205...   121   7e-26
ref|XP_002322191.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_004172274.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   120   1e-25
emb|CBI14971.3| unnamed protein product [Vitis vinifera]              115   4e-24
ref|XP_002278083.1| PREDICTED: probable spermidine synthase-like...   115   4e-24

>ref|XP_004152566.1| PREDICTED: uncharacterized protein LOC101205232 [Cucumis sativus]
          Length = 331

 Score =  121 bits (303), Expect = 7e-26
 Identities = 68/113 (60%), Positives = 81/113 (71%)
 Frame = -2

Query: 341 LLDTPGNIHSISFLFKKLKTNTYFDVFATXXXXXXXXXXXXXXXXXGSAAHLLLELYPDV 162
           LLD PGNIHSISFLFK L TNTYFDVFAT                 GSAA  +L+LYP+V
Sbjct: 105 LLDAPGNIHSISFLFKSL-TNTYFDVFATLPPILPSGPIGILGFGAGSAARSILKLYPEV 163

Query: 161 NIHGYELDPSVISVGREFFELSKLEEQNPTRLLIHIGDALEASVVEEKFAGIL 3
            +HG+ELDPSV++VGREFF +SKLE++ P RL I+IG+AL A+V    FAGIL
Sbjct: 164 VVHGWELDPSVVAVGREFFGVSKLEKKYPDRLFIYIGNALNANVT-GGFAGIL 215


>ref|XP_002322191.1| predicted protein [Populus trichocarpa] gi|222869187|gb|EEF06318.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  120 bits (302), Expect = 9e-26
 Identities = 69/113 (61%), Positives = 78/113 (69%)
 Frame = -2

Query: 341 LLDTPGNIHSISFLFKKLKTNTYFDVFATXXXXXXXXXXXXXXXXXGSAAHLLLELYPDV 162
           LLD PGNIHSISFLFK L TNTYFDVFA                  GSAA LLLELYP V
Sbjct: 47  LLDAPGNIHSISFLFKSL-TNTYFDVFAALPPIIPPGPIAILGFGAGSAARLLLELYPGV 105

Query: 161 NIHGYELDPSVISVGREFFELSKLEEQNPTRLLIHIGDALEASVVEEKFAGIL 3
            +HG+ELD SVI VGREFF L KLE+Q P RL I++G+AL A  V++ F+GIL
Sbjct: 106 VVHGWELDSSVIDVGREFFGLKKLEKQYPDRLFIYVGNALSAK-VKDGFSGIL 157


>ref|XP_004172274.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101205232,
           partial [Cucumis sativus]
          Length = 323

 Score =  120 bits (301), Expect = 1e-25
 Identities = 68/113 (60%), Positives = 80/113 (70%)
 Frame = -2

Query: 341 LLDTPGNIHSISFLFKKLKTNTYFDVFATXXXXXXXXXXXXXXXXXGSAAHLLLELYPDV 162
           LLD PGNIHSISFLFK L TNTYFDVFAT                 GSAA  +L+LYP+V
Sbjct: 105 LLDAPGNIHSISFLFKSL-TNTYFDVFATLPPILPSGPIGILGFGAGSAARSILKLYPEV 163

Query: 161 NIHGYELDPSVISVGREFFELSKLEEQNPTRLLIHIGDALEASVVEEKFAGIL 3
            +HG+ELDPSV++VGREFF +SKLE+  P RL I+IG+AL A+V    FAGIL
Sbjct: 164 VVHGWELDPSVVAVGREFFGVSKLEKXYPDRLFIYIGNALNANVT-GGFAGIL 215


>emb|CBI14971.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  115 bits (288), Expect = 4e-24
 Identities = 66/113 (58%), Positives = 77/113 (68%)
 Frame = -2

Query: 341 LLDTPGNIHSISFLFKKLKTNTYFDVFATXXXXXXXXXXXXXXXXXGSAAHLLLELYPDV 162
           LLD PGNIHSISFL K   T+TYFDV AT                 GSAA L+LE YP V
Sbjct: 109 LLDGPGNIHSISFLLKSF-TDTYFDVLATLPAILPPGPLGILGFGAGSAARLILETYPQV 167

Query: 161 NIHGYELDPSVISVGREFFELSKLEEQNPTRLLIHIGDALEASVVEEKFAGIL 3
            +HG+ELDPSVI VGRE+F LSKLE+++P RL I+IG+AL AS V   F+GIL
Sbjct: 168 VVHGWELDPSVIEVGREYFGLSKLEKEHPHRLFIYIGNALNAS-VRNGFSGIL 219


>ref|XP_002278083.1| PREDICTED: probable spermidine synthase-like [Vitis vinifera]
          Length = 334

 Score =  115 bits (288), Expect = 4e-24
 Identities = 66/113 (58%), Positives = 77/113 (68%)
 Frame = -2

Query: 341 LLDTPGNIHSISFLFKKLKTNTYFDVFATXXXXXXXXXXXXXXXXXGSAAHLLLELYPDV 162
           LLD PGNIHSISFL K   T+TYFDV AT                 GSAA L+LE YP V
Sbjct: 109 LLDGPGNIHSISFLLKSF-TDTYFDVLATLPAILPPGPLGILGFGAGSAARLILETYPQV 167

Query: 161 NIHGYELDPSVISVGREFFELSKLEEQNPTRLLIHIGDALEASVVEEKFAGIL 3
            +HG+ELDPSVI VGRE+F LSKLE+++P RL I+IG+AL AS V   F+GIL
Sbjct: 168 VVHGWELDPSVIEVGREYFGLSKLEKEHPHRLFIYIGNALNAS-VRNGFSGIL 219


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