BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029186
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,...    75   4e-12
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]    75   5e-12
ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09

>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Vitis vinifera]
          Length = 547

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/67 (55%), Positives = 47/67 (70%)
 Frame = -2

Query: 306 SVPLVFDLLIQTYSKFRMFGTAFEACRFIEGHGLSCSIISCNTLIHLVKKSGRNELVWNI 127
           S P VFDLL+Q+YSK RMF   F+ C ++E HG S S+IS NTL+H+V+KS    LVW I
Sbjct: 154 SNPRVFDLLVQSYSKLRMFEICFDVCCYLEEHGFSLSLISFNTLLHVVQKSDNYPLVWKI 213

Query: 126 Y*EMDRM 106
           Y  M R+
Sbjct: 214 YEHMIRV 220


>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/76 (47%), Positives = 51/76 (67%)
 Frame = -2

Query: 312 IYSVPLVFDLLIQTYSKFRMFGTAFEACRFIEGHGLSCSIISCNTLIHLVKKSGRNELVW 133
           I S PLVF+LL+Q Y+K R+F   F+ C ++E HG   S++S NTLIH+V+KS +  LVW
Sbjct: 160 IVSSPLVFNLLVQAYAKLRLFEIGFKICFYLEEHGFFLSLLSFNTLIHVVQKSDQYPLVW 219

Query: 132 NIY*EMDRMVHLVVLP 85
            IY   + M+H  + P
Sbjct: 220 KIY---EHMIHKRIYP 232


>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 36/67 (53%), Positives = 46/67 (68%)
 Frame = -2

Query: 306 SVPLVFDLLIQTYSKFRMFGTAFEACRFIEGHGLSCSIISCNTLIHLVKKSGRNELVWNI 127
           S P VFDLL+Q+YSK RMF   F+ C ++E HG S S+IS N L+H+V+KS    LVW I
Sbjct: 154 SNPRVFDLLVQSYSKLRMFEICFDVCCYLEEHGFSLSLISFNXLLHVVQKSDNYPLVWKI 213

Query: 126 Y*EMDRM 106
           Y  M R+
Sbjct: 214 YEHMIRV 220


>ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|222848159|gb|EEE85706.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/76 (48%), Positives = 49/76 (64%)
 Frame = -2

Query: 312 IYSVPLVFDLLIQTYSKFRMFGTAFEACRFIEGHGLSCSIISCNTLIHLVKKSGRNELVW 133
           I S PLVFDLL+Q Y+K RMF   F+ C  +E H  + S+IS NTLIH+V+KS ++ L W
Sbjct: 159 IISSPLVFDLLVQAYAKQRMFEIGFDVCCRLEEHRFTLSLISFNTLIHVVQKSDKSPLAW 218

Query: 132 NIY*EMDRMVHLVVLP 85
            IY   + M+H    P
Sbjct: 219 KIY---EHMLHRRTYP 231


>ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cucumis sativus]
          Length = 539

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/66 (51%), Positives = 43/66 (65%)
 Frame = -2

Query: 306 SVPLVFDLLIQTYSKFRMFGTAFEACRFIEGHGLSCSIISCNTLIHLVKKSGRNELVWNI 127
           S P VFDLL+QT +K R+   A   C  +E  G S S+IS NTLIH+V+KS +N  VW I
Sbjct: 157 SSPFVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDQNLKVWKI 216

Query: 126 Y*EMDR 109
           Y +M R
Sbjct: 217 YEQMIR 222