BLASTX nr result

ID: Coptis21_contig00029185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029185
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322181.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_004155086.1| PREDICTED: jmjC domain-containing protein 4-...    81   8e-14
ref|XP_004138273.1| PREDICTED: jmjC domain-containing protein 4-...    81   8e-14
ref|XP_002511357.1| transcription factor, putative [Ricinus comm...    81   8e-14
emb|CBI14986.3| unnamed protein product [Vitis vinifera]               77   1e-12

>ref|XP_002322181.1| predicted protein [Populus trichocarpa] gi|222869177|gb|EEF06308.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 37/46 (80%), Positives = 39/46 (84%)
 Frame = -3

Query: 140 ISYKEFTEKYLVKNEPVVLTGLMDDWKACKDWVTSEGKPNLHFFST 3
           ISY EF E+YL KN+PVVLTGLMDDWKACKDWV   GKPNL FFST
Sbjct: 17  ISYNEFVERYLAKNQPVVLTGLMDDWKACKDWVFDSGKPNLKFFST 62


>ref|XP_004155086.1| PREDICTED: jmjC domain-containing protein 4-like [Cucumis sativus]
          Length = 480

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 34/46 (73%), Positives = 39/46 (84%)
 Frame = -3

Query: 140 ISYKEFTEKYLVKNEPVVLTGLMDDWKACKDWVTSEGKPNLHFFST 3
           +SYKEF E+Y+ KN+PVVLTGLMDDWKAC DWV   G+PNL FFST
Sbjct: 17  LSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSFFST 62


>ref|XP_004138273.1| PREDICTED: jmjC domain-containing protein 4-like [Cucumis sativus]
          Length = 480

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 34/46 (73%), Positives = 39/46 (84%)
 Frame = -3

Query: 140 ISYKEFTEKYLVKNEPVVLTGLMDDWKACKDWVTSEGKPNLHFFST 3
           +SYKEF E+Y+ KN+PVVLTGLMDDWKAC DWV   G+PNL FFST
Sbjct: 17  LSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSFFST 62


>ref|XP_002511357.1| transcription factor, putative [Ricinus communis]
           gi|223550472|gb|EEF51959.1| transcription factor,
           putative [Ricinus communis]
          Length = 462

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = -3

Query: 140 ISYKEFTEKYLVKNEPVVLTGLMDDWKACKDWVTSEGKPNLHFFST 3
           +SY EF E+YL KN+PVVLTGLMD+W+ACKDWVT +G PNL FFST
Sbjct: 17  LSYDEFVERYLSKNQPVVLTGLMDNWRACKDWVTDDGYPNLQFFST 62


>emb|CBI14986.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 32/46 (69%), Positives = 38/46 (82%)
 Frame = -3

Query: 140 ISYKEFTEKYLVKNEPVVLTGLMDDWKACKDWVTSEGKPNLHFFST 3
           +SY +F E+YL+KN PVVL GLMD W+ACKDWVT  G+PNL FFST
Sbjct: 17  LSYSDFVERYLMKNRPVVLRGLMDGWRACKDWVTHTGQPNLEFFST 62


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