BLASTX nr result

ID: Coptis21_contig00029171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029171
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24537.1| unknown [Picea sitchensis]                             108   2e-31
gb|ABK23613.1| unknown [Picea sitchensis]                             108   2e-31
emb|CBI27803.3| unnamed protein product [Vitis vinifera]              131   5e-29
ref|XP_002277926.1| PREDICTED: flavonoid 3'-monooxygenase [Vitis...   131   5e-29
emb|CBI27804.3| unnamed protein product [Vitis vinifera]              130   1e-28

>gb|ABK24537.1| unknown [Picea sitchensis]
          Length = 514

 Score =  108 bits (269), Expect(2) = 2e-31
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = -1

Query: 333 PHLARENCKVHGYDIVQGARVIVNTWSIGRDPTLWDAPNEFRPERFMGRAIDVKGQNFEL 154
           PHL+ + C++ GYDI    RV VN WSIGRD   W+ PNEFRPERF G  +DV G+++EL
Sbjct: 375 PHLSTQRCRIAGYDIPANTRVFVNVWSIGRDDQSWENPNEFRPERFKGSTVDVMGRDYEL 434

Query: 153 FPFGSGRRMCPG 118
            PFGSGRRMCPG
Sbjct: 435 LPFGSGRRMCPG 446



 Score = 52.4 bits (124), Expect(2) = 2e-31
 Identities = 21/38 (55%), Positives = 30/38 (78%)
 Frame = -3

Query: 115 PGYNLGLKLIESGLANLLHGFTWELPNQMKPRDLNMEE 2
           PG +LGLK+++  LANL+HGF W+LP+   P+DL+M E
Sbjct: 445 PGNSLGLKVVQIALANLIHGFQWKLPDGQSPKDLDMGE 482


>gb|ABK23613.1| unknown [Picea sitchensis]
          Length = 361

 Score =  108 bits (269), Expect(2) = 2e-31
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = -1

Query: 333 PHLARENCKVHGYDIVQGARVIVNTWSIGRDPTLWDAPNEFRPERFMGRAIDVKGQNFEL 154
           PHL+ + C++ GYDI    RV VN WSIGRD   W+ PNEFRPERF G  +DV G+++EL
Sbjct: 222 PHLSTQRCRIAGYDIPANTRVFVNVWSIGRDDQSWENPNEFRPERFKGSTVDVMGRDYEL 281

Query: 153 FPFGSGRRMCPG 118
            PFGSGRRMCPG
Sbjct: 282 LPFGSGRRMCPG 293



 Score = 52.4 bits (124), Expect(2) = 2e-31
 Identities = 21/38 (55%), Positives = 30/38 (78%)
 Frame = -3

Query: 115 PGYNLGLKLIESGLANLLHGFTWELPNQMKPRDLNMEE 2
           PG++LG K++E  LANL+HGF W+LP+   P+DL+M E
Sbjct: 292 PGHSLGHKVVEIALANLIHGFQWKLPDGQSPKDLHMGE 329


>emb|CBI27803.3| unnamed protein product [Vitis vinifera]
          Length = 295

 Score =  131 bits (330), Expect = 5e-29
 Identities = 57/72 (79%), Positives = 63/72 (87%)
 Frame = -1

Query: 333 PHLARENCKVHGYDIVQGARVIVNTWSIGRDPTLWDAPNEFRPERFMGRAIDVKGQNFEL 154
           PHLA  +C V GYDI +G RV++NTWSIGRDP LWDAP EFRPERF+G+AIDVKGQNFEL
Sbjct: 135 PHLALHDCNVAGYDIRKGTRVLINTWSIGRDPNLWDAPEEFRPERFLGKAIDVKGQNFEL 194

Query: 153 FPFGSGRRMCPG 118
            PFGSGRRMCPG
Sbjct: 195 LPFGSGRRMCPG 206



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/64 (51%), Positives = 40/64 (62%)
 Frame = -3

Query: 193 GKSN*CKGSKFRAIPFWIWEEDVSRTPGYNLGLKLIESGLANLLHGFTWELPNQMKPRDL 14
           GK+   KG  F  +PF          PGY+LGLK+I S LAN+LHGF W+LP  MK  +L
Sbjct: 182 GKAIDVKGQNFELLPFGSGRR---MCPGYSLGLKMIRSSLANMLHGFHWKLPGDMKAEEL 238

Query: 13  NMEE 2
           NMEE
Sbjct: 239 NMEE 242


>ref|XP_002277926.1| PREDICTED: flavonoid 3'-monooxygenase [Vitis vinifera]
          Length = 508

 Score =  131 bits (330), Expect = 5e-29
 Identities = 57/72 (79%), Positives = 63/72 (87%)
 Frame = -1

Query: 333 PHLARENCKVHGYDIVQGARVIVNTWSIGRDPTLWDAPNEFRPERFMGRAIDVKGQNFEL 154
           PHLA  +C V GYDI +G RV++NTWSIGRDP LWDAP EFRPERF+G+AIDVKGQNFEL
Sbjct: 376 PHLALHDCNVAGYDIRKGTRVLINTWSIGRDPNLWDAPEEFRPERFLGKAIDVKGQNFEL 435

Query: 153 FPFGSGRRMCPG 118
            PFGSGRRMCPG
Sbjct: 436 LPFGSGRRMCPG 447



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/64 (51%), Positives = 40/64 (62%)
 Frame = -3

Query: 193 GKSN*CKGSKFRAIPFWIWEEDVSRTPGYNLGLKLIESGLANLLHGFTWELPNQMKPRDL 14
           GK+   KG  F  +PF          PGY+LGLK+I S LAN+LHGF W+LP  MK  +L
Sbjct: 423 GKAIDVKGQNFELLPFGSGRR---MCPGYSLGLKMIRSSLANMLHGFHWKLPGDMKAEEL 479

Query: 13  NMEE 2
           NMEE
Sbjct: 480 NMEE 483


>emb|CBI27804.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  130 bits (326), Expect = 1e-28
 Identities = 56/72 (77%), Positives = 64/72 (88%)
 Frame = -1

Query: 333 PHLARENCKVHGYDIVQGARVIVNTWSIGRDPTLWDAPNEFRPERFMGRAIDVKGQNFEL 154
           PHLA ++C V GYDI +G RV+VNTWSIGRDP +WDAP EFRPERF+G+AIDVKGQ+FEL
Sbjct: 135 PHLALQDCNVAGYDIRRGTRVLVNTWSIGRDPNIWDAPEEFRPERFLGKAIDVKGQSFEL 194

Query: 153 FPFGSGRRMCPG 118
            PFGSGRRMCPG
Sbjct: 195 LPFGSGRRMCPG 206



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/64 (51%), Positives = 41/64 (64%)
 Frame = -3

Query: 193 GKSN*CKGSKFRAIPFWIWEEDVSRTPGYNLGLKLIESGLANLLHGFTWELPNQMKPRDL 14
           GK+   KG  F  +PF          PGY+LGLK+I+S LAN+LHGF W+LP  MK  +L
Sbjct: 182 GKAIDVKGQSFELLPFGSGRR---MCPGYSLGLKMIQSSLANMLHGFHWKLPWDMKTEEL 238

Query: 13  NMEE 2
           NMEE
Sbjct: 239 NMEE 242


Top