BLASTX nr result
ID: Coptis21_contig00029170
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00029170 (571 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|2... 42 5e-06 >ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa] Length = 665 Score = 42.0 bits (97), Expect(3) = 5e-06 Identities = 21/46 (45%), Positives = 34/46 (73%), Gaps = 2/46 (4%) Frame = +1 Query: 439 VGVVNASA--ALVEEGLQYFHSMKQVYGVDSALPAVEHYGRVTNFL 570 +GV++A A +V+EGL+ F+SM++VYG++ P +EHYG V + L Sbjct: 398 LGVLSACAHSGMVDEGLRIFNSMEEVYGIE---PGMEHYGCVVDLL 440 Score = 28.1 bits (61), Expect(3) = 5e-06 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +2 Query: 344 CGCLDMEWEVFDSME 388 CG LDM W+VF+ ME Sbjct: 341 CGRLDMAWDVFEKME 355 Score = 24.3 bits (51), Expect(3) = 5e-06 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +3 Query: 387 KHKVVLWNAMIGGIAILGR 443 K +V WNAMI G+ + GR Sbjct: 356 KKEVFTWNAMICGLGMHGR 374