BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029169
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60294.1| hypothetical protein VITISV_023401 [Vitis vinifera]    54   9e-10
emb|CBI29695.3| unnamed protein product [Vitis vinifera]               54   9e-10
ref|XP_002264237.2| PREDICTED: prolycopene isomerase, chloroplas...    54   9e-10
ref|XP_003550455.1| PREDICTED: LOW QUALITY PROTEIN: prolycopene ...    55   2e-09
ref|XP_002331097.1| predicted protein [Populus trichocarpa] gi|2...    54   2e-09

>emb|CAN60294.1| hypothetical protein VITISV_023401 [Vitis vinifera]
          Length = 586

 Score = 53.5 bits (127), Expect(2) = 9e-10
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = +2

Query: 5   KQEAKKCVRATKAVVSNASMWDTSKLLPEEVVPQTYKDMI 124
           K  + + +RA KAVVSNASMWDT  LLP+EVVP++Y+D I
Sbjct: 345 KLRSGQFIRAKKAVVSNASMWDTLNLLPKEVVPKSYQDRI 384



 Score = 34.3 bits (77), Expect(2) = 9e-10
 Identities = 17/28 (60%), Positives = 19/28 (67%)
 Frame = +1

Query: 100 PTDIQGHDRQTSQ*CESFMNLHLGFDAE 183
           P   Q   + T Q CESFM+LHLGFDAE
Sbjct: 377 PKSYQDRIKTTPQ-CESFMHLHLGFDAE 403


>emb|CBI29695.3| unnamed protein product [Vitis vinifera]
          Length = 570

 Score = 53.5 bits (127), Expect(2) = 9e-10
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = +2

Query: 5   KQEAKKCVRATKAVVSNASMWDTSKLLPEEVVPQTYKDMI 124
           K  + + +RA KAVVSNASMWDT  LLP+EVVP++Y+D I
Sbjct: 329 KLRSGQFIRAKKAVVSNASMWDTLNLLPKEVVPKSYQDRI 368



 Score = 34.3 bits (77), Expect(2) = 9e-10
 Identities = 17/28 (60%), Positives = 19/28 (67%)
 Frame = +1

Query: 100 PTDIQGHDRQTSQ*CESFMNLHLGFDAE 183
           P   Q   + T Q CESFM+LHLGFDAE
Sbjct: 361 PKSYQDRIKTTPQ-CESFMHLHLGFDAE 387


>ref|XP_002264237.2| PREDICTED: prolycopene isomerase, chloroplastic-like [Vitis
           vinifera]
          Length = 551

 Score = 53.5 bits (127), Expect(2) = 9e-10
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = +2

Query: 5   KQEAKKCVRATKAVVSNASMWDTSKLLPEEVVPQTYKDMI 124
           K  + + +RA KAVVSNASMWDT  LLP+EVVP++Y+D I
Sbjct: 310 KLRSGQFIRAKKAVVSNASMWDTLNLLPKEVVPKSYQDRI 349



 Score = 34.3 bits (77), Expect(2) = 9e-10
 Identities = 17/28 (60%), Positives = 19/28 (67%)
 Frame = +1

Query: 100 PTDIQGHDRQTSQ*CESFMNLHLGFDAE 183
           P   Q   + T Q CESFM+LHLGFDAE
Sbjct: 342 PKSYQDRIKTTPQ-CESFMHLHLGFDAE 368


>ref|XP_003550455.1| PREDICTED: LOW QUALITY PROTEIN: prolycopene isomerase,
           chloroplastic-like [Glycine max]
          Length = 530

 Score = 55.1 bits (131), Expect(2) = 2e-09
 Identities = 25/41 (60%), Positives = 33/41 (80%)
 Frame = +2

Query: 5   KQEAKKCVRATKAVVSNASMWDTSKLLPEEVVPQTYKDMID 127
           K  + + +RA KAVVSNASMWDT KLLP+EVVP++Y D ++
Sbjct: 289 KLRSGQFIRAKKAVVSNASMWDTLKLLPKEVVPKSYSDRVN 329



 Score = 32.0 bits (71), Expect(2) = 2e-09
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = +1

Query: 130 TSQ*CESFMNLHLGFDAE 183
           T+  C+SFM+LHLGFDAE
Sbjct: 330 TTTQCDSFMHLHLGFDAE 347


>ref|XP_002331097.1| predicted protein [Populus trichocarpa] gi|222872825|gb|EEF09956.1|
           predicted protein [Populus trichocarpa]
          Length = 579

 Score = 53.5 bits (127), Expect(2) = 2e-09
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = +2

Query: 5   KQEAKKCVRATKAVVSNASMWDTSKLLPEEVVPQTYKDMID 127
           K  + + +RA KAV+SNASMWDTS LLP+EV+P++Y D I+
Sbjct: 338 KLRSGQFIRAKKAVISNASMWDTSNLLPKEVLPKSYLDRIN 378



 Score = 33.1 bits (74), Expect(2) = 2e-09
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +1

Query: 130 TSQ*CESFMNLHLGFDAE 183
           T+  CESFM+LHLGFDAE
Sbjct: 379 TTPQCESFMHLHLGFDAE 396