BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029165
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68252.1| hypothetical protein VITISV_043921 [Vitis vinifera]    84   2e-14
emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulga...    83   3e-14
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    83   4e-14
gb|AFM94019.1| LINE RNAaseH [Beta vulgaris]                            82   5e-14
emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga...    82   5e-14

>emb|CAN68252.1| hypothetical protein VITISV_043921 [Vitis vinifera]
          Length = 433

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 56/174 (32%), Positives = 81/174 (46%)
 Frame = -3

Query: 568 LKIQSIFLPRSTLADVLKWNLTKSGIHSVKSVYHRLGLRTAPSYRYNTTLAFWQNDLNPR 389
           LKIQ+  + R    D + W  +KSG+ SVKS+Y  L    +  + Y   +  W+  + P+
Sbjct: 176 LKIQAFRVQREN-EDKMVWTTSKSGVFSVKSLYSXLEPGGSAMFPY---IGIWKASVPPK 231

Query: 388 ATLFAWKCYHSIVPTREHLSTIFYIPNKACLLCNSAIETVNHLLLQCPFTRNIWYSTPWC 209
              FAW+     + T + L    Y     C LC +  ETV+HLLL C  TR +W      
Sbjct: 232 VAFFAWEASWGKILTLDQLQRRGYSLANRCFLCLAEAETVDHLLLHCVMTRTLWNLLFSL 291

Query: 208 FRLSACGNLKVKEWIDLWYRPPNNWPIDKKLWTGACVFITWHIWLERCKILFKN 47
           F +    +  VKE +  W+       I KK W  A + I W +W ER  + F N
Sbjct: 292 FGVEWVLSGTVKETLLGWHGAFVG-KIRKKAWQMAPLCIFWSVWKERNSLAFGN 344


>emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 55/177 (31%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
 Frame = -3

Query: 544  PRSTLADVLKWNLTKSGIHSVKSVYHRLGLRTAPSYRYNTTLAFWQNDLNPRATLFAWKC 365
            P     D L W  +KSG  S KSV  +L     P Y+ +     W   +  R  LF W  
Sbjct: 1008 PARQAQDHLIWAFSKSGSFSTKSVSRQLVKLQHPHYQ-DAIRGVWVGLVPHRIELFVWLA 1066

Query: 364  YHSIVPTREHLSTIFYIPNKA--CLLCNSAIETVNHLLLQCPFTRNIWYSTPWCFRLSAC 191
                + TR+ L+++  I      C LC +  ET  HLLL CP    IW      +R+   
Sbjct: 1067 LLGKINTRDKLASLGIIHGDCNICPLCMTEPETAEHLLLHCPVASQIWSWWIGLWRIKWA 1126

Query: 190  GNLKVKEWIDLWYRPPNNWPIDKKLWTGACVFITWHIWLERCKILFKNTKPNGVSLM 20
              L ++E    W+ P N+ P  KK+W+     I W +W ER + +F N  P+ V ++
Sbjct: 1127 FPLSLREAFTQWFWPKNS-PFFKKVWSAVFFIIVWTLWKERNQRIFSN-NPSTVKVL 1181


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
 Frame = -3

Query: 586  FDLDTSLKIQSIFLPRSTLADVLKWNLTKSGIHSVKSVYHRLGLRTAPSYRYNTTLA--- 416
            F  DT++K+ +  +P   L+D+  W+ +KSG+  VK +Y             NTT     
Sbjct: 996  FHPDTAMKVLATHIPVEDLSDIFVWSESKSGVPRVKDIY---AFYLLDKGELNTTKENRQ 1052

Query: 415  ----FWQNDLNPRATLFAWKCYHSIVPTREHLSTIFYIPNKACLLCNSAIETVNHLLLQC 248
                FW +DL P+   F W+  +  + T  +L     +  + C LC    E  +HL   C
Sbjct: 1053 FWNKFWASDLLPKWKFFTWRLLNKALATSSNLRKRNILIQEMCSLCKQDKENESHLFRDC 1112

Query: 247  PFTRNIWYSTPWCFRLSACGNLKVKEWIDLWYRPPNNWPID--KKLWTGACVFITWHIWL 74
              +R++W S+    R+     + +++WI  + +    W  D  K       +   W IW+
Sbjct: 1113 NISRHVWASSLLGIRICPMTVISIEDWIKNFLK--LLWKEDGVKSPRVSEFIATLWAIWI 1170

Query: 73   ERCKILFKNTKPNGVSLM 20
             R  ++F++ + N V++M
Sbjct: 1171 HRNNVIFRSEEVNPVAIM 1188


>gb|AFM94019.1| LINE RNAaseH [Beta vulgaris]
          Length = 416

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 8/190 (4%)
 Frame = -3

Query: 571 SLKIQSIFLPRSTLADVLKWNLTKSGIHSVKSVYHRLGLRTAPSYRYNTTLAFWQNDLNP 392
           S+ +  +   R   +D L WN +  G  SV+S Y  L  R+ P    N     W+  +  
Sbjct: 26  SILVWMVISVRHNESDELIWNFSMDGNFSVRSFYEELHKRSKPCLE-NLPQKIWKGLVPF 84

Query: 391 RATLFAWKCYHSIVPTREHLSTIFYIPNK--ACLLCNSAIETVNHLLLQCPFTRNIW--- 227
           R  +F W      + T++ L+++  IP     C LC+   E ++HL L CPF+  IW   
Sbjct: 85  RIEIFTWLSVLERINTKKKLASLNIIPPSEVGCSLCSLEPEDISHLFLFCPFSMEIWAWW 144

Query: 226 ---YSTPWCFRLSACGNLKVKEWIDLWYRPPNNWPIDKKLWTGACVFITWHIWLERCKIL 56
              ++  W +  S   NL + +W       P    + KK+W  A + I W IW ER + +
Sbjct: 145 WDLWNLSWVWPKSL--NLALSQW-----NYPRKEKLFKKIWLAAFIVIIWSIWRERNERI 197

Query: 55  FKNTKPNGVS 26
           F N K + VS
Sbjct: 198 F-NKKESSVS 206


>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 56/172 (32%), Positives = 80/172 (46%), Gaps = 3/172 (1%)
 Frame = -3

Query: 556  SIFLPRSTLADVLKWNLTKSGIHSVKSVYHRL-GLRTAPSYRYNTTLAFWQNDLNPRATL 380
            S+ L  ST  D L W   KSG  SVKS    L      P  +       W+  + PR  +
Sbjct: 1005 SVCLSPST-DDRLIWTPHKSGAFSVKSCSKELTNTALKPQSKIRIWGRLWRGLIPPRIEV 1063

Query: 379  FAWKCYHSIVPTREHLSTIFYIP--NKACLLCNSAIETVNHLLLQCPFTRNIWYSTPWCF 206
            F+W      + +R+ L+T+  IP  +  C++CN A ET +HLLL CPF  +IW      +
Sbjct: 1064 FSWVALLGKLNSRQKLATLNIIPPDDAVCIMCNGAPETSDHLLLHCPFASSIWLWWLGIW 1123

Query: 205  RLSACGNLKVKEWIDLWYRPPNNWPIDKKLWTGACVFITWHIWLERCKILFK 50
             +S      + E  + WY    N P  +K+W      I W IW ER   +F+
Sbjct: 1124 NVSWVFPKNLFEAFEQWYCHKKN-PFFRKVWCSIFSIIIWTIWKERNARIFR 1174