BLASTX nr result

ID: Coptis21_contig00029161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029161
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22459.3| unnamed protein product [Vitis vinifera]               62   4e-08
ref|XP_002264190.1| PREDICTED: interferon-related developmental ...    62   4e-08
ref|XP_002285282.1| PREDICTED: interferon-related developmental ...    59   4e-07
gb|ADD09560.1| unknown [Trifolium repens]                              55   8e-06

>emb|CBI22459.3| unnamed protein product [Vitis vinifera]
          Length = 406

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
 Frame = +2

Query: 5   HVKDNKLFHDFFELRPATEQDITE--AELSVSDSEEAGIRYVFQPELRKGERL-YQRLYV 175
           H+++N+  H+ FE+     +D++    +L   DS+E    Y ++PELRK  +   QR+++
Sbjct: 313 HMQENEFLHELFEIVTPKREDVSGYGCQLYELDSKEVIAEY-YEPELRKNNKSSIQRMFM 371

Query: 176 SSNSVINKAKTQIMNKQRYLSEAKNAGYY 262
           S NS  NKA TQ++NK+R LS+ +  G+Y
Sbjct: 372 SPNSFHNKAMTQLLNKRRMLSQKRRNGHY 400


>ref|XP_002264190.1| PREDICTED: interferon-related developmental regulator 1-like [Vitis
           vinifera]
          Length = 402

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
 Frame = +2

Query: 5   HVKDNKLFHDFFELRPATEQDITE--AELSVSDSEEAGIRYVFQPELRKGERL-YQRLYV 175
           H+++N+  H+ FE+     +D++    +L   DS+E    Y ++PELRK  +   QR+++
Sbjct: 309 HMQENEFLHELFEIVTPKREDVSGYGCQLYELDSKEVIAEY-YEPELRKNNKSSIQRMFM 367

Query: 176 SSNSVINKAKTQIMNKQRYLSEAKNAGYY 262
           S NS  NKA TQ++NK+R LS+ +  G+Y
Sbjct: 368 SPNSFHNKAMTQLLNKRRMLSQKRRNGHY 396


>ref|XP_002285282.1| PREDICTED: interferon-related developmental regulator 1 [Vitis
           vinifera] gi|302142206|emb|CBI19409.3| unnamed protein
           product [Vitis vinifera]
          Length = 446

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/92 (36%), Positives = 52/92 (56%)
 Frame = +2

Query: 5   HVKDNKLFHDFFELRPATEQDITEAELSVSDSEEAGIRYVFQPELRKGERLYQRLYVSSN 184
           H+++N+  H+ F   P  +         +S SE           L  GE+   R+Y S N
Sbjct: 372 HMQENEFLHEVFGFTPKRKH--------LSGSEH---------HLSSGEK---RMYKSPN 411

Query: 185 SVINKAKTQIMNKQRYLSEAKNAGYYSLTLQD 280
           SV+NKA+TQ++NKQR LS+ +NAG+Y++ L D
Sbjct: 412 SVVNKARTQLLNKQRMLSQGRNAGHYAVGLGD 443


>gb|ADD09560.1| unknown [Trifolium repens]
          Length = 435

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/91 (34%), Positives = 48/91 (52%)
 Frame = +2

Query: 8   VKDNKLFHDFFELRPATEQDITEAELSVSDSEEAGIRYVFQPELRKGERLYQRLYVSSNS 187
           ++DN+  HD F   P  +  +   E  +S  E+                   RL+ S NS
Sbjct: 364 IQDNEFLHDVFGFSPKKKY-LGNGEHRMSGGEK-------------------RLFKSPNS 403

Query: 188 VINKAKTQIMNKQRYLSEAKNAGYYSLTLQD 280
           V+NKA+TQ++NKQR LSE +N G+YS+ + +
Sbjct: 404 VLNKARTQLLNKQRILSEGRNFGHYSVNMDE 434


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