BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029159
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002528337.1| conserved hypothetical protein [Ricinus comm...    78   1e-12
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    76   5e-12
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    76   6e-12
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    75   8e-12

>ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|222848975|gb|EEE86522.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 39/105 (37%), Positives = 61/105 (58%)
 Frame = -3

Query: 575 YSTTGFCVYKLDWVTRKWIELDNIHDRVLFLGHXXXXXXXXSDFPECKPNSIYFTDDHYE 396
           Y T  F ++++D+    W+ + ++ D+ +F+G          D P C+ NS+YFTDD++E
Sbjct: 357 YRTLLFGLFRMDFDKETWVSMTSLDDQAVFVGGNHSASVLTCDLPGCEKNSVYFTDDYWE 416

Query: 395 GYFGQEEYGIGPHDMGIFNLKDCTVEPHYRTDSKNINPAPIWVEP 261
                E+Y  G HDMG+FNLKD +V+  Y+ D+  I P P W  P
Sbjct: 417 RM--NEDYLYGGHDMGVFNLKDKSVKHFYQLDALKIQPPPCWFLP 459


>ref|XP_002528337.1| conserved hypothetical protein [Ricinus communis]
           gi|223532205|gb|EEF34009.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 102

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 39/101 (38%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
 Frame = -3

Query: 560 FCVYKLDWVTRKWIELDNIHDRVLFLGHXXXXXXXXSDFPECKPNSIYFTDDH-YEGYFG 384
           F VY+LD   + W+E+++++++VLFLG          DF  C  NSIYFTDD+ Y+ Y  
Sbjct: 2   FHVYRLDSSEQNWVEVESLNNQVLFLGMNHSMSLSAQDFSGCDRNSIYFTDDNLYQMY-- 59

Query: 383 QEEYGIGPHDMGIFNLKDCTVEPHYRTDSKNINPAPIWVEP 261
            E+Y  G HD G F+L+D  V+       + ++P+P+W+ P
Sbjct: 60  -EDYSYGGHDFGKFSLEDKVVKLFNGHKIEKVDPSPLWIVP 99


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
 Frame = -3

Query: 575 YSTTGFCVYKLDWVTRKWIELDNIHDRVLFLGHXXXXXXXXSDFPECKPNSIYFTDDHYE 396
           Y T GF V+K++W    W  ++ + +RVLF+G         SDF  C  + IYFTDD+ E
Sbjct: 285 YRTVGFEVFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSE 344

Query: 395 GYFGQEEYGIGPHDMGIFNLKDCTVEP----HYRTDSKNINPAPIWVEP 261
                ++   G HD+G+F L+D ++EP    +  + S+   P PIWV P
Sbjct: 345 ---SNDDDACGKHDLGVFRLRDKSIEPLPCFNQNSCSRLRWPLPIWVSP 390


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 43/106 (40%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
 Frame = -3

Query: 575 YSTTGFCVYKLDWVTRKWIELDNIHDRVLFLGHXXXXXXXXSDFPECKPNSIYFTDDHYE 396
           Y TT F V +LD    +W  + ++ DR LFLG          DFP CK N IY+TDD+ E
Sbjct: 285 YRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSE 344

Query: 395 GYFGQEEYGI-GPHDMGIFNLKDCTVEPHYRTDSKNINPAPIWVEP 261
             +     GI G  D+GIFNL+D ++EP   +  +   P P+WV P
Sbjct: 345 DNYD----GIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTP 386


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 43/106 (40%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
 Frame = -3

Query: 575 YSTTGFCVYKLDWVTRKWIELDNIHDRVLFLGHXXXXXXXXSDFPECKPNSIYFTDDHYE 396
           Y TT F V +LD    +W  + ++ DR LFLG          DFP CK N IY+TDD+ E
Sbjct: 285 YRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSE 344

Query: 395 GYFGQEEYGI-GPHDMGIFNLKDCTVEPHYRTDSKNINPAPIWVEP 261
             +     GI G  D+GIFNL+D ++EP   +  +   P P+WV P
Sbjct: 345 DNYD----GIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTP 386