BLASTX nr result

ID: Coptis21_contig00029158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029158
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG15875.1| WRKY transcription factor [Bruguiera gymnorhiza]       78   1e-12
ref|XP_002320852.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
gb|ACV92008.1| WRKY transcription factor 6 [(Populus tomentosa x...    75   1e-11
ref|XP_002511908.1| WRKY transcription factor, putative [Ricinus...    75   1e-11
emb|CBI40493.3| unnamed protein product [Vitis vinifera]               74   3e-11

>dbj|BAG15875.1| WRKY transcription factor [Bruguiera gymnorhiza]
          Length = 341

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 12/110 (10%)
 Frame = +3

Query: 369 MEISKDIEQKPLINELTEGKELVNQLRLHLSPTSP--TGELLIEKVLSSFNKALLMLNWN 542
           ME     EQ+ LI+EL++G +L  QLRLHL+  S   T +LL++++LSS+  +L +LNW+
Sbjct: 1   MENGWSWEQRTLISELSQGMKLAKQLRLHLTAASSVETRDLLLQRILSSYENSLSILNWS 60

Query: 543 GSEAEAGTKRTSVAMIESPQSM--SPRSDDSDL--------RDVYKKRKT 662
           GS     T R S  + ESP S+  SPRSDD D          D  KKRKT
Sbjct: 61  GSTVHPQTVRLSAGVPESPLSINGSPRSDDFDRGLGDNPSHNDASKKRKT 110


>ref|XP_002320852.1| predicted protein [Populus trichocarpa] gi|222861625|gb|EEE99167.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 51/108 (47%), Positives = 68/108 (62%), Gaps = 11/108 (10%)
 Frame = +3

Query: 369 MEISKDIEQKPLINELTEGKELVNQLRLHLSPTS--PTGELLIEKVLSSFNKALLMLNWN 542
           ME+S + E K LI+ELT+GKEL  QL  HL+P+S     + L++K+LSS+ KAL MLNW 
Sbjct: 1   MELSMEWEHKTLISELTQGKELAKQLSNHLNPSSSLEARQFLVDKILSSYEKALSMLNW- 59

Query: 543 GSEAEAGTKRT--SVAMIESPQSMSPRSDDSDL-------RDVYKKRK 659
           G+ A    K T  +V  + S  + SPRS+ SD        +DVYKKRK
Sbjct: 60  GALAADQPKPTIGTVEPLHSFANSSPRSEVSDQDCKEECNKDVYKKRK 107


>gb|ACV92008.1| WRKY transcription factor 6 [(Populus tomentosa x P. bolleana) x P.
           tomentosa]
          Length = 369

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 48/108 (44%), Positives = 68/108 (62%), Gaps = 11/108 (10%)
 Frame = +3

Query: 369 MEISKDIEQKPLINELTEGKELVNQLRLHLSPTS--PTGELLIEKVLSSFNKALLMLNWN 542
           ME+S + E K LI+EL++GKEL  QL  HL+P+S     + L++K+LSS+ KAL +LNW 
Sbjct: 1   MELSMEWEHKTLISELSQGKELAKQLSNHLNPSSSLEARQFLVDKILSSYEKALSLLNW- 59

Query: 543 GSEAEAGTKRT--SVAMIESPQSMSPRSDDSDL-------RDVYKKRK 659
           G+  +   K T  +V  + S  + SPRS+ SD        +DVYKKRK
Sbjct: 60  GALVDQQPKPTIGTVEPLHSLANSSPRSEVSDQDCKEECNKDVYKKRK 107


>ref|XP_002511908.1| WRKY transcription factor, putative [Ricinus communis]
           gi|223549088|gb|EEF50577.1| WRKY transcription factor,
           putative [Ricinus communis]
          Length = 333

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 50/106 (47%), Positives = 65/106 (61%), Gaps = 15/106 (14%)
 Frame = +3

Query: 390 EQKPLINELTEGKELVNQLRLHLSPTS--PTGELLIEKVLSSFNKALLMLNWNGSEAEAG 563
           EQK L+NELT+GKEL  QLR HL+  S     + L+E++LSS+ KAL MLNW+ S  E  
Sbjct: 4   EQKILVNELTQGKELAEQLRNHLNNISSFEMRQGLVEQILSSYEKALSMLNWDASAIET- 62

Query: 564 TKRTSVAMIESP------QSMSPRSD--DSDLRD-----VYKKRKT 662
             +  +  +ESP      +S SPRS+  D D +D     VYKKRKT
Sbjct: 63  --KPIITTLESPHSNYAKRSPSPRSEVSDQDCKDQCHGGVYKKRKT 106


>emb|CBI40493.3| unnamed protein product [Vitis vinifera]
          Length = 360

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 46/107 (42%), Positives = 65/107 (60%), Gaps = 9/107 (8%)
 Frame = +3

Query: 369 MEISKDIEQKPLINELTEGKELVNQLRLHLSPTS--PTGELLIEKVLSSFNKALLMLNWN 542
           ME++++ E   LINELT+G+E+ NQL+ HL+P+S   T E L+EK+LSS+ KAL ML   
Sbjct: 1   MEMAREWEHNTLINELTQGREMANQLKNHLTPSSSRETREFLVEKILSSYEKALSMLKCG 60

Query: 543 GSEAEAGTKRTSVAMIESPQSMSPRSDDSDL-------RDVYKKRKT 662
           G  +E         +  S    SPRS+ S+        +DV+KKRKT
Sbjct: 61  GFVSE---------LPHSLPGSSPRSEGSNQDFKDQAGKDVFKKRKT 98


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