BLASTX nr result
ID: Coptis21_contig00029155
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00029155 (217 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEO22189.1| ABCG subfamily transporter protein [Solanum tuber... 62 5e-08 ref|XP_002514349.1| ATP-binding cassette transporter, putative [... 62 6e-08 gb|AFA43816.1| ABCG/PDR subfamily ABC protein [Petunia x hybrida] 61 1e-07 gb|AFA43815.1| ABCG/PDR subfamily ABC transporter [Petunia axill... 61 1e-07 ref|XP_002285178.2| PREDICTED: pleiotropic drug resistance prote... 61 1e-07 >gb|AEO22189.1| ABCG subfamily transporter protein [Solanum tuberosum] Length = 1423 Score = 62.0 bits (149), Expect = 5e-08 Identities = 41/98 (41%), Positives = 49/98 (50%), Gaps = 32/98 (32%) Frame = +1 Query: 1 NVLEFFGLMGFQCPYRKGVRLLTFLQEDS*VISKKD*KQYWVRKD--------------- 135 NVLEFF +GF+CP RKGV FLQE V S+KD +QYW R+D Sbjct: 565 NVLEFFEYLGFKCPQRKGV--ADFLQE---VTSRKDQEQYWSRRDEPYRFITACEFSDVF 619 Query: 136 -----------------DKSKSQHATLTTKTFGVNKKE 198 DKSKS A LTTK +G++KKE Sbjct: 620 QSFDVGRKLGDELAVPFDKSKSHPAALTTKRYGISKKE 657 >ref|XP_002514349.1| ATP-binding cassette transporter, putative [Ricinus communis] gi|223546805|gb|EEF48303.1| ATP-binding cassette transporter, putative [Ricinus communis] Length = 1309 Score = 61.6 bits (148), Expect = 6e-08 Identities = 42/98 (42%), Positives = 49/98 (50%), Gaps = 32/98 (32%) Frame = +1 Query: 1 NVLEFFGLMGFQCPYRKGVRLLTFLQEDS*VISKKD*KQYWVRKD--------------- 135 NVLEFF MGF+CP RKGV FLQE V S+KD +QYW RK+ Sbjct: 270 NVLEFFEHMGFRCPERKGV--ADFLQE---VTSRKDQEQYWTRKEEPYSFISVKEFAEAF 324 Query: 136 -----------------DKSKSQHATLTTKTFGVNKKE 198 DKSK+ A LTTK +GV+KKE Sbjct: 325 QSFHIGRKLGDELAAPFDKSKAHPAALTTKRYGVSKKE 362 >gb|AFA43816.1| ABCG/PDR subfamily ABC protein [Petunia x hybrida] Length = 1452 Score = 60.8 bits (146), Expect = 1e-07 Identities = 42/98 (42%), Positives = 48/98 (48%), Gaps = 32/98 (32%) Frame = +1 Query: 1 NVLEFFGLMGFQCPYRKGVRLLTFLQEDS*VISKKD*KQYWVRKD--------------- 135 NVLEFF MGF CP RKGV FLQE V S+KD +QYW R++ Sbjct: 411 NVLEFFEYMGFICPERKGV--ADFLQE---VTSRKDQEQYWARREESYKFITVREFSEAF 465 Query: 136 -----------------DKSKSQHATLTTKTFGVNKKE 198 DKSKS A LTTK +GV+KKE Sbjct: 466 QAFHIGRKLGDELAVPFDKSKSHPAALTTKRYGVSKKE 503 >gb|AFA43815.1| ABCG/PDR subfamily ABC transporter [Petunia axillaris] Length = 1452 Score = 60.8 bits (146), Expect = 1e-07 Identities = 42/98 (42%), Positives = 48/98 (48%), Gaps = 32/98 (32%) Frame = +1 Query: 1 NVLEFFGLMGFQCPYRKGVRLLTFLQEDS*VISKKD*KQYWVRKD--------------- 135 NVLEFF MGF CP RKGV FLQE V S+KD +QYW R++ Sbjct: 411 NVLEFFEYMGFICPERKGV--ADFLQE---VTSRKDQEQYWARREESYKFITVREFSEAF 465 Query: 136 -----------------DKSKSQHATLTTKTFGVNKKE 198 DKSKS A LTTK +GV+KKE Sbjct: 466 QAFHIGRKLGDELAVPFDKSKSHPAALTTKRYGVSKKE 503 >ref|XP_002285178.2| PREDICTED: pleiotropic drug resistance protein 1 isoform 1 [Vitis vinifera] Length = 1430 Score = 60.8 bits (146), Expect = 1e-07 Identities = 42/98 (42%), Positives = 48/98 (48%), Gaps = 32/98 (32%) Frame = +1 Query: 1 NVLEFFGLMGFQCPYRKGVRLLTFLQEDS*VISKKD*KQYWVRKD--------------- 135 +VLEFF GF+CP RKGV FLQE V SKKD +QYW RK+ Sbjct: 410 DVLEFFESTGFRCPERKGV--ADFLQE---VTSKKDQQQYWARKEEPYRFVTVKEFAEAF 464 Query: 136 -----------------DKSKSQHATLTTKTFGVNKKE 198 DK+KS A LTTK +GVNKKE Sbjct: 465 QSFHTGRKVGDELASPYDKTKSHPAALTTKKYGVNKKE 502