BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029154
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    73   3e-11
gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japo...    72   5e-11
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    70   2e-10
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    67   2e-09
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    65   6e-09

>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 46/125 (36%), Positives = 67/125 (53%)
 Frame = +3

Query: 123 MIVVSWNCRGIGLPSTLRALKIKITYGKERPKLVYLSETKASLAKSEHLISKLGDLYSYF 302
           M ++ WNCRG+G P T+R L+   T+    P +++LSET  +  +SE L S+LG   + F
Sbjct: 1   MNILCWNCRGVGNPRTVRQLRKWSTF--YAPDIMFLSETMINKTESEALKSRLG-FANAF 57

Query: 303 VVPPVDRAGGLWLLWDPKLSIDILYLNSWIIHAQISGDNVVPWFFSGIYGNAKPQIRRWQ 482
            V    RAGGL + W  +LS  ++  +   I   I  D    W F GIYG AK + +   
Sbjct: 58  GVSSRGRAGGLCVFWREELSFSLVSFSQHHICGDID-DGAKKWRFVGIYGWAKEEEKHHT 116

Query: 483 WEM*R 497
           W + R
Sbjct: 117 WSLMR 121


>gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japonica Group]
          Length = 1170

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/124 (33%), Positives = 65/124 (52%)
 Frame = +3

Query: 126 IVVSWNCRGIGLPSTLRALKIKITYGKERPKLVYLSETKASLAKSEHLISKLGDLYSYFV 305
           + +SWNCRG+G P  ++ L   +     RPK+V+LSET+ +    E++  ++G L     
Sbjct: 93  VFLSWNCRGLGRPRAVQELVCMVQ--THRPKVVFLSETRQNQGFVENIKWQIG-LRGCLA 149

Query: 306 VPPVDRAGGLWLLWDPKLSIDILYLNSWIIHAQISGDNVVPWFFSGIYGNAKPQIRRWQW 485
           V  + + GG+ L WD  +++ I   N   I A I+  N  PW  + +YG  K Q R   W
Sbjct: 150 VNGIGKGGGIALFWDESVNVTIKSYNLRHIDAVITEQNQDPWRATFVYGEPKAQDRHLMW 209

Query: 486 EM*R 497
            + R
Sbjct: 210 TLLR 213


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 46/127 (36%), Positives = 64/127 (50%)
 Frame = +3

Query: 117 TAMIVVSWNCRGIGLPSTLRALKIKITYGKERPKLVYLSETKASLAKSEHLISKLGDLYS 296
           TAMI +SWNCRG+G P T+ AL  +I   + +P  ++L ET    A+ E L SKLG    
Sbjct: 305 TAMIGISWNCRGLGNPRTVLAL-CEINKSR-KPDFIFLIETLVHSAQVEKLKSKLG-FEG 361

Query: 297 YFVVPPVDRAGGLWLLWDPKLSIDILYLNSWIIHAQISGDNVVPWFFSGIYGNAKPQIRR 476
            F V  V R GGL  LW       +L  +   I  ++S ++ + W  +G YG      R 
Sbjct: 362 AFCVDRVGRGGGLAFLWRKAGMFSLLXYSQSHIDMEVSEEDGLQWRVTGFYGFPDRSQRH 421

Query: 477 WQWEM*R 497
             W + R
Sbjct: 422 LSWNLLR 428


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
           Japonica Group]
          Length = 1382

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
 Frame = +3

Query: 129 VVSW--NCRGIGLPSTLRALKIKITYGKERPKLVYLSETKASLAKSEHLISKLGDLYSYF 302
           +V+W  NCRG+G  +T+  L+  +     RP LV+LSETK    ++ +L+  LG   S F
Sbjct: 6   LVTWGRNCRGLGSAATVGELRWLVK--SLRPSLVFLSETKMRDKQARNLMWSLGFSGS-F 62

Query: 303 VVPPVDRAGGLWLLWDPKLSIDILYLNSWIIHAQISGDNVVPWFFSGIYGNAKPQIRRWQ 482
            V     +GGL L W    ++ +   NS  I   +S + + PW  S +YG  K ++R + 
Sbjct: 63  AVSCEGLSGGLALFWTTAYTVSLRGFNSHFIDVLVSTEELPPWRISFVYGEPKRELRHFF 122

Query: 483 WEM*R 497
           W + R
Sbjct: 123 WNLLR 127


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1936

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
 Frame = +3

Query: 120  AMIVVSWNCRGIGLPSTLRALKIKITYGKERPKLVYLSETKASLAKSEHLISKLGDLYSY 299
            AM  ++WNCRG+G  +T++ L+  I   K   +LV+L ET+ S+ K   L  KL     +
Sbjct: 635  AMSCLAWNCRGLGNTATVQDLRALIQ--KAGSQLVFLCETRQSVEKMSRLRRKLA-FRGF 691

Query: 300  FVVPPVDRAGGLWLLWDPKLSIDILYLNSWIIHAQISGDNVVP-WFFSGIYGNAKPQIRR 476
              V    ++GGL L WD  +S+D+  +N   I A +      P W  + +YG  + + R 
Sbjct: 692  VGVSSEGKSGGLALYWDESVSVDVKDINKRYIDAYVRLSPDEPQWHITFVYGEPRVENRH 751

Query: 477  WQWEM*R 497
              W + R
Sbjct: 752  RMWSLLR 758