BLASTX nr result

ID: Coptis21_contig00029151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029151
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|2...   204   6e-51
emb|CBI40924.3| unnamed protein product [Vitis vinifera]              196   2e-48
ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...   193   1e-47
ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855...   186   2e-45
gb|EEE58139.1| hypothetical protein OsJ_09050 [Oryza sativa Japo...   182   2e-44

>ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|222833998|gb|EEE72475.1|
            predicted protein [Populus trichocarpa]
          Length = 1224

 Score =  204 bits (519), Expect = 6e-51
 Identities = 101/128 (78%), Positives = 112/128 (87%)
 Frame = -1

Query: 384  ENEDRHAALHAGKSFLLELLDSVVNDKDLAKELYKKYSGIHRRKVRAWQMICILSRVC** 205
            ENED HAAL +GK FL ELLDS VNDKDLAKELYKKYSGIHRRK+RAWQMIC+LSR    
Sbjct: 710  ENEDCHAALESGKLFLQELLDSAVNDKDLAKELYKKYSGIHRRKIRAWQMICVLSRFVTD 769

Query: 204  DIVQQVTASLHITIYRNNMPSIRQYLETFAIQIYLKFPSLVKEQLSPIFQDHNMRPQALS 25
            DIV QVT SLHI++YRNN P++RQYLETFAI IYLKFP LV+EQL PI +D+NM+PQALS
Sbjct: 770  DIVAQVTHSLHISLYRNNFPAVRQYLETFAINIYLKFPLLVREQLVPILRDYNMKPQALS 829

Query: 24   SYVFIAAN 1
            SYVFIAAN
Sbjct: 830  SYVFIAAN 837


>emb|CBI40924.3| unnamed protein product [Vitis vinifera]
          Length = 1203

 Score =  196 bits (497), Expect = 2e-48
 Identities = 96/130 (73%), Positives = 112/130 (86%)
 Frame = -1

Query: 390  VKENEDRHAALHAGKSFLLELLDSVVNDKDLAKELYKKYSGIHRRKVRAWQMICILSRVC 211
            + EN+D  AA+ +GK FLLELLDSVVND DL+KELYKKYS IHR K+RAWQMIC+LSR  
Sbjct: 680  INENDDCRAAIESGKLFLLELLDSVVNDTDLSKELYKKYSRIHRHKIRAWQMICVLSRFI 739

Query: 210  **DIVQQVTASLHITIYRNNMPSIRQYLETFAIQIYLKFPSLVKEQLSPIFQDHNMRPQA 31
              DIVQ+V+  LHI++YRNN+PS+RQYLETFAI IYLKFPSLV +QL PI QD++MRPQA
Sbjct: 740  HQDIVQRVSCFLHISLYRNNLPSVRQYLETFAIHIYLKFPSLVVDQLVPILQDYDMRPQA 799

Query: 30   LSSYVFIAAN 1
            LSSYVFIAAN
Sbjct: 800  LSSYVFIAAN 809


>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
            gi|223536320|gb|EEF37970.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1744

 Score =  193 bits (491), Expect = 1e-47
 Identities = 99/133 (74%), Positives = 111/133 (83%), Gaps = 5/133 (3%)
 Frame = -1

Query: 384  ENEDRHAALHAGKSFLLELLDSVVNDKDLAKELYKKYSGIHRRKVRAWQMICILSRVC** 205
            ENED  AAL +GK FLLELLDS VNDKDLAKELYKKYSGIHRRK+R WQMIC+LSR    
Sbjct: 1226 ENEDCSAALESGKIFLLELLDSAVNDKDLAKELYKKYSGIHRRKIRVWQMICVLSRFVTD 1285

Query: 204  DIVQQVTASLHITIYRNNMPSIRQYLETFAIQIYLKFPSLVKEQLSPIFQDHNMRPQ--- 34
            DIV +VT SLHI +YRNN+P++RQYLETFAI IYLKFP+LV EQL PI +D++MRPQ   
Sbjct: 1286 DIVGKVTCSLHIALYRNNLPAVRQYLETFAINIYLKFPTLVGEQLVPILRDYDMRPQVNI 1345

Query: 33   --ALSSYVFIAAN 1
              ALSSYVFIAAN
Sbjct: 1346 TSALSSYVFIAAN 1358


>ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855390 [Vitis vinifera]
          Length = 920

 Score =  186 bits (471), Expect = 2e-45
 Identities = 96/147 (65%), Positives = 112/147 (76%), Gaps = 17/147 (11%)
 Frame = -1

Query: 390 VKENEDRHAALHAGKSFLLELLDSVVNDKDLAKELYKKYS-----------------GIH 262
           + EN+D  AA+ +GK FLLELLDSVVND DL+KELYKKYS                  IH
Sbjct: 550 INENDDCRAAIESGKLFLLELLDSVVNDTDLSKELYKKYSRKWAFGIKTSDTLVVAGAIH 609

Query: 261 RRKVRAWQMICILSRVC**DIVQQVTASLHITIYRNNMPSIRQYLETFAIQIYLKFPSLV 82
           R K+RAWQMIC+LSR    DIVQ+V+  LHI++YRNN+PS+RQYLETFAI IYLKFPSLV
Sbjct: 610 RHKIRAWQMICVLSRFIHQDIVQRVSCFLHISLYRNNLPSVRQYLETFAIHIYLKFPSLV 669

Query: 81  KEQLSPIFQDHNMRPQALSSYVFIAAN 1
            +QL PI QD++MRPQALSSYVFIAAN
Sbjct: 670 VDQLVPILQDYDMRPQALSSYVFIAAN 696


>gb|EEE58139.1| hypothetical protein OsJ_09050 [Oryza sativa Japonica Group]
          Length = 1695

 Score =  182 bits (462), Expect = 2e-44
 Identities = 88/130 (67%), Positives = 108/130 (83%)
 Frame = -1

Query: 390  VKENEDRHAALHAGKSFLLELLDSVVNDKDLAKELYKKYSGIHRRKVRAWQMICILSRVC 211
            VK   +   AL +GK FLL+LLDS VNDKD+++ELYKKYS +HRRKVR WQMIC+LS+  
Sbjct: 1170 VKSTLETEEALRSGKLFLLKLLDSAVNDKDISRELYKKYSSVHRRKVRIWQMICVLSQYV 1229

Query: 210  **DIVQQVTASLHITIYRNNMPSIRQYLETFAIQIYLKFPSLVKEQLSPIFQDHNMRPQA 31
              DIV++VT+S+HI +YRNN+P++RQYLETFAI IYLKFP+L +EQL PIF D+ MR QA
Sbjct: 1230 EDDIVKEVTSSIHICLYRNNLPAVRQYLETFAILIYLKFPALAEEQLIPIFHDNEMRQQA 1289

Query: 30   LSSYVFIAAN 1
            LSSYVFIAAN
Sbjct: 1290 LSSYVFIAAN 1299


Top