BLASTX nr result

ID: Coptis21_contig00029150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029150
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521498.1| NAC domain-containing protein, putative [Ric...   199   3e-49
ref|XP_002311276.1| NAC domain protein, IPR003441 [Populus trich...   198   4e-49
ref|XP_002316163.1| NAC domain protein, IPR003441 [Populus trich...   196   2e-48
emb|CBI24118.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_002269543.1| PREDICTED: protein SOMBRERO [Vitis vinifera]      193   1e-47

>ref|XP_002521498.1| NAC domain-containing protein, putative [Ricinus communis]
           gi|223539295|gb|EEF40887.1| NAC domain-containing
           protein, putative [Ricinus communis]
          Length = 314

 Score =  199 bits (505), Expect = 3e-49
 Identities = 98/131 (74%), Positives = 102/131 (77%)
 Frame = -3

Query: 413 LKEKCRIGSGPQNEWYFFSHKDKKYPXXXXXXXXXXXGFWKATGRDKAIHLSNSKTIGMR 234
           LKEKCRIGSGPQNEWYFFSHKDKKYP           GFWKATGRDKAIHLSNSK IGMR
Sbjct: 55  LKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIHLSNSKRIGMR 114

Query: 233 KTLVFYTGRAPHGQKTDWIMHEYRLNDDQGMTLEVQQEDGWVVCRVFKKKSHHREFQPEV 54
           KTLVFYTGRAPHGQKTDWIMHEYRL+DD        QEDGWVVCRVFKKK+  R F PE 
Sbjct: 115 KTLVFYTGRAPHGQKTDWIMHEYRLDDDNSEV----QEDGWVVCRVFKKKNQTRGFLPEA 170

Query: 53  SPNREEIHFSH 21
           +   +E HFSH
Sbjct: 171 A---QEEHFSH 178


>ref|XP_002311276.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222851096|gb|EEE88643.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 319

 Score =  198 bits (503), Expect = 4e-49
 Identities = 95/131 (72%), Positives = 104/131 (79%)
 Frame = -3

Query: 413 LKEKCRIGSGPQNEWYFFSHKDKKYPXXXXXXXXXXXGFWKATGRDKAIHLSNSKTIGMR 234
           L++KC+IGSGPQNEWYFFSHKDKKYP           GFWKATGRDKAIH+SNS+ IGMR
Sbjct: 55  LRDKCKIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIHISNSQRIGMR 114

Query: 233 KTLVFYTGRAPHGQKTDWIMHEYRLNDDQGMTLEVQQEDGWVVCRVFKKKSHHREFQPEV 54
           KTLVFYTGRAPHGQKTDWIMHEYRL+DD        QEDGWVVCRVFKKK+  R F PEV
Sbjct: 115 KTLVFYTGRAPHGQKTDWIMHEYRLDDDNSEV----QEDGWVVCRVFKKKNQTRGFLPEV 170

Query: 53  SPNREEIHFSH 21
           S   +E+HFSH
Sbjct: 171 S---QEVHFSH 178


>ref|XP_002316163.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222865203|gb|EEF02334.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 318

 Score =  196 bits (497), Expect = 2e-48
 Identities = 97/130 (74%), Positives = 102/130 (78%)
 Frame = -3

Query: 413 LKEKCRIGSGPQNEWYFFSHKDKKYPXXXXXXXXXXXGFWKATGRDKAIHLSNSKTIGMR 234
           LK+KCRIGSGPQNEWYFFSHKDKKYP           GFWKATGRDKAIHLSNS+ IGMR
Sbjct: 54  LKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIHLSNSQRIGMR 113

Query: 233 KTLVFYTGRAPHGQKTDWIMHEYRLNDDQGMTLEVQQEDGWVVCRVFKKKSHHREFQPEV 54
           KTLVFYTGRAPHGQKTDWIMHEYRL+DD        QEDGWVVCRVFKKK+  R F PEV
Sbjct: 114 KTLVFYTGRAPHGQKTDWIMHEYRLDDDNSEV----QEDGWVVCRVFKKKNQTRGFLPEV 169

Query: 53  SPNREEIHFS 24
           S   +E HFS
Sbjct: 170 S---QEEHFS 176


>emb|CBI24118.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score =  193 bits (491), Expect = 1e-47
 Identities = 95/137 (69%), Positives = 104/137 (75%)
 Frame = -3

Query: 413 LKEKCRIGSGPQNEWYFFSHKDKKYPXXXXXXXXXXXGFWKATGRDKAIHLSNSKTIGMR 234
           LK+KCRIGSG QNEWYFFSHKDKKYP           GFWKATGRDKAIHLSNSK IG+R
Sbjct: 55  LKDKCRIGSGSQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAIHLSNSKRIGLR 114

Query: 233 KTLVFYTGRAPHGQKTDWIMHEYRLNDDQGMTLEVQQEDGWVVCRVFKKKSHHREFQPEV 54
           KTLVFYTGRAPHGQKTDWIMHEYRL+DD        QEDGWVVCRVFKKK+H+R FQ E 
Sbjct: 115 KTLVFYTGRAPHGQKTDWIMHEYRLDDDNADV----QEDGWVVCRVFKKKNHNRGFQSEA 170

Query: 53  SPNREEIHFSHTTKRGS 3
           +   +E + +H    GS
Sbjct: 171 A---QEEYLTHMRASGS 184


>ref|XP_002269543.1| PREDICTED: protein SOMBRERO [Vitis vinifera]
          Length = 312

 Score =  193 bits (491), Expect = 1e-47
 Identities = 95/137 (69%), Positives = 104/137 (75%)
 Frame = -3

Query: 413 LKEKCRIGSGPQNEWYFFSHKDKKYPXXXXXXXXXXXGFWKATGRDKAIHLSNSKTIGMR 234
           LK+KCRIGSG QNEWYFFSHKDKKYP           GFWKATGRDKAIHLSNSK IG+R
Sbjct: 55  LKDKCRIGSGSQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAIHLSNSKRIGLR 114

Query: 233 KTLVFYTGRAPHGQKTDWIMHEYRLNDDQGMTLEVQQEDGWVVCRVFKKKSHHREFQPEV 54
           KTLVFYTGRAPHGQKTDWIMHEYRL+DD        QEDGWVVCRVFKKK+H+R FQ E 
Sbjct: 115 KTLVFYTGRAPHGQKTDWIMHEYRLDDDNADV----QEDGWVVCRVFKKKNHNRGFQSEA 170

Query: 53  SPNREEIHFSHTTKRGS 3
           +   +E + +H    GS
Sbjct: 171 A---QEEYLTHMRASGS 184


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