BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029138
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265078.2| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   325   8e-87
emb|CBI23170.3| unnamed protein product [Vitis vinifera]              325   8e-87
ref|XP_002518536.1| tyrosyl-DNA phosphodiesterase, putative [Ric...   307   2e-81
ref|XP_002305614.1| predicted protein [Populus trichocarpa] gi|2...   299   5e-79
dbj|BAK06716.1| predicted protein [Hordeum vulgare subsp. vulgare]    290   3e-76

>ref|XP_002265078.2| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Vitis vinifera]
          Length = 621

 Score =  325 bits (833), Expect = 8e-87
 Identities = 160/227 (70%), Positives = 180/227 (79%), Gaps = 1/227 (0%)
 Frame = -3

Query: 861  MAEFALSMSSGQSDDRKPLGLGKAQIIWPSVEDVRCSLEGYAAGSAIPSPQKNVERDFLK 682
            M E A SMSSG  DD+ PLGLGK  IIWP+VEDVRCSLEGYAAG+AIPSPQKNVE++FLK
Sbjct: 392  MTELASSMSSGSCDDKTPLGLGKPLIIWPTVEDVRCSLEGYAAGNAIPSPQKNVEKEFLK 451

Query: 681  KYWAKWKASHTGRCRAMPHIKTFTRYNGQKVAWFLLTSANLSKAAWGALQKNNSQLMIRS 502
            KYWAKWKA+HTGRCRAMPHIKT+TRYNGQ +AWFLLTSANLSKAAWGALQKNNSQLMIRS
Sbjct: 452  KYWAKWKATHTGRCRAMPHIKTYTRYNGQNLAWFLLTSANLSKAAWGALQKNNSQLMIRS 511

Query: 501  YELGVLFLPGTVKDGCGFSCTDIDRNLEGRCLSSGNDQECRTKLVTLCYQGSLKTD-STX 325
            YELGVLFLP  +  G GFSCTD     + +C  S N +  RTKLVTL ++G+  +D S+ 
Sbjct: 512  YELGVLFLPSPINRGQGFSCTDNGSPSKNKCGLSENTKSQRTKLVTLTWEGNRSSDSSSE 571

Query: 324  XXXXXXXXXXXXXXYTSEDIPWSWDRQYNKKDVHGQVWPRHVQLYSS 184
                          Y+SED+PWSWDR+Y KKDV GQVWPRHVQLYSS
Sbjct: 572  VIPLPVPYELPPKQYSSEDVPWSWDRRYYKKDVCGQVWPRHVQLYSS 618


>emb|CBI23170.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score =  325 bits (833), Expect = 8e-87
 Identities = 160/227 (70%), Positives = 180/227 (79%), Gaps = 1/227 (0%)
 Frame = -3

Query: 861  MAEFALSMSSGQSDDRKPLGLGKAQIIWPSVEDVRCSLEGYAAGSAIPSPQKNVERDFLK 682
            M E A SMSSG  DD+ PLGLGK  IIWP+VEDVRCSLEGYAAG+AIPSPQKNVE++FLK
Sbjct: 449  MTELASSMSSGSCDDKTPLGLGKPLIIWPTVEDVRCSLEGYAAGNAIPSPQKNVEKEFLK 508

Query: 681  KYWAKWKASHTGRCRAMPHIKTFTRYNGQKVAWFLLTSANLSKAAWGALQKNNSQLMIRS 502
            KYWAKWKA+HTGRCRAMPHIKT+TRYNGQ +AWFLLTSANLSKAAWGALQKNNSQLMIRS
Sbjct: 509  KYWAKWKATHTGRCRAMPHIKTYTRYNGQNLAWFLLTSANLSKAAWGALQKNNSQLMIRS 568

Query: 501  YELGVLFLPGTVKDGCGFSCTDIDRNLEGRCLSSGNDQECRTKLVTLCYQGSLKTD-STX 325
            YELGVLFLP  +  G GFSCTD     + +C  S N +  RTKLVTL ++G+  +D S+ 
Sbjct: 569  YELGVLFLPSPINRGQGFSCTDNGSPSKNKCGLSENTKSQRTKLVTLTWEGNRSSDSSSE 628

Query: 324  XXXXXXXXXXXXXXYTSEDIPWSWDRQYNKKDVHGQVWPRHVQLYSS 184
                          Y+SED+PWSWDR+Y KKDV GQVWPRHVQLYSS
Sbjct: 629  VIPLPVPYELPPKQYSSEDVPWSWDRRYYKKDVCGQVWPRHVQLYSS 675


>ref|XP_002518536.1| tyrosyl-DNA phosphodiesterase, putative [Ricinus communis]
            gi|223542381|gb|EEF43923.1| tyrosyl-DNA
            phosphodiesterase, putative [Ricinus communis]
          Length = 665

 Score =  307 bits (786), Expect = 2e-81
 Identities = 153/227 (67%), Positives = 178/227 (78%), Gaps = 1/227 (0%)
 Frame = -3

Query: 861  MAEFALSMSSGQSDDRKPLGLGKAQIIWPSVEDVRCSLEGYAAGSAIPSPQKNVERDFLK 682
            M E A S+SSG S+DR PLGLG+ +IIWP+VEDVRCSLEGYAAG+AIPSP KNVE+D LK
Sbjct: 437  MTELATSLSSGLSEDRTPLGLGEPRIIWPTVEDVRCSLEGYAAGNAIPSPLKNVEKDILK 496

Query: 681  KYWAKWKASHTGRCRAMPHIKTFTRYNGQKVAWFLLTSANLSKAAWGALQKNNSQLMIRS 502
            KYW+KWKA+H+GRCRAMPHIKTFTRYNGQK+AW LLTSANLSKAAWGALQKNNSQLMIRS
Sbjct: 497  KYWSKWKATHSGRCRAMPHIKTFTRYNGQKLAWLLLTSANLSKAAWGALQKNNSQLMIRS 556

Query: 501  YELGVLFLPGTVKD-GCGFSCTDIDRNLEGRCLSSGNDQECRTKLVTLCYQGSLKTDSTX 325
            YELGVLFLP + K+ GC  SCTD     E       + +E +T+LVTL +QG  K  S+ 
Sbjct: 557  YELGVLFLPSSYKNHGCRLSCTDHGARSEDEYGLLADSEEPKTELVTLMWQGP-KDPSSQ 615

Query: 324  XXXXXXXXXXXXXXYTSEDIPWSWDRQYNKKDVHGQVWPRHVQLYSS 184
                          Y+SED+PWSWDR+Y+KKDV+GQVWPR VQLY+S
Sbjct: 616  VIPLPVPYELPPQPYSSEDVPWSWDRRYSKKDVYGQVWPRLVQLYTS 662


>ref|XP_002305614.1| predicted protein [Populus trichocarpa] gi|222848578|gb|EEE86125.1|
            predicted protein [Populus trichocarpa]
          Length = 599

 Score =  299 bits (766), Expect = 5e-79
 Identities = 148/220 (67%), Positives = 172/220 (78%), Gaps = 1/220 (0%)
 Frame = -3

Query: 861  MAEFALSMSSGQSDDRKPLGLGKAQIIWPSVEDVRCSLEGYAAGSAIPSPQKNVERDFLK 682
            M E A+SMSSG ++D+ PLGLG  QIIWP+VEDVRCSLEGYAAG+AIP P KNVE+ FLK
Sbjct: 381  MTELAISMSSGYAEDKTPLGLGVPQIIWPTVEDVRCSLEGYAAGNAIPGPLKNVEKGFLK 440

Query: 681  KYWAKWKASHTGRCRAMPHIKTFTRYNGQKVAWFLLTSANLSKAAWGALQKNNSQLMIRS 502
            KYWAKWKASH+GRCRAMPHIKTFTRYNGQK+AWFLLTS+NLSKAAWGALQKNNSQLMIRS
Sbjct: 441  KYWAKWKASHSGRCRAMPHIKTFTRYNGQKLAWFLLTSSNLSKAAWGALQKNNSQLMIRS 500

Query: 501  YELGVLFLPGTVKD-GCGFSCTDIDRNLEGRCLSSGNDQECRTKLVTLCYQGSLKTDSTX 325
            YELGVLFLP +++  G GFSCT         C S  + +E RT LVTL +QG+    ++ 
Sbjct: 501  YELGVLFLPSSIRRYGSGFSCTSNGGPSMDNCGSLVDSEELRTTLVTLKWQGT-SDSASK 559

Query: 324  XXXXXXXXXXXXXXYTSEDIPWSWDRQYNKKDVHGQVWPR 205
                          Y+SED+PWSWDR+Y+KKDV+GQVWPR
Sbjct: 560  VIPLPVPYELPPIPYSSEDVPWSWDRRYSKKDVYGQVWPR 599


>dbj|BAK06716.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  290 bits (742), Expect = 3e-76
 Identities = 142/222 (63%), Positives = 169/222 (76%), Gaps = 2/222 (0%)
 Frame = -3

Query: 861  MAEFALSMSSGQSDDRKPLGLGKAQIIWPSVEDVRCSLEGYAAGSAIPSPQKNVERDFLK 682
            M+EFA S+S+G++DD   LG+GK  I+WP+VEDVRCS+EGYAAGS IPSPQKNVE+DFL+
Sbjct: 451  MSEFACSLSAGKADDGSQLGIGKPLIVWPTVEDVRCSIEGYAAGSCIPSPQKNVEKDFLR 510

Query: 681  KYWAKWKASHTGRCRAMPHIKTFTRYNGQKVAWFLLTSANLSKAAWGALQKNNSQLMIRS 502
            KYW++WKA H GRCRAMPHIKTFTRYNGQ +AWFLLTS+NLSKAAWGALQKNN+QLMIRS
Sbjct: 511  KYWSRWKADHVGRCRAMPHIKTFTRYNGQNIAWFLLTSSNLSKAAWGALQKNNTQLMIRS 570

Query: 501  YELGVLFLPGTVKDGCGFSCTDIDR-NLEGRCLSSGNDQECRTKLVTLCYQGSLKTD-ST 328
            YELGVLFLP T++    FSCTD  R NL+   L     +  +TKLVTLC++G  + D S 
Sbjct: 571  YELGVLFLPKTLQSVPQFSCTDKSRSNLDKLALG----KNIKTKLVTLCWKGDEEKDPSA 626

Query: 327  XXXXXXXXXXXXXXXYTSEDIPWSWDRQYNKKDVHGQVWPRH 202
                           Y  ED+PWSWDR+Y KKDV+G VW RH
Sbjct: 627  EVVRLPVPYQLPPQLYGPEDVPWSWDRRYTKKDVYGSVWSRH 668