BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029130
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Gl...   116   2e-24
emb|CBI38030.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot...   114   6e-24
emb|CBI15777.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002275596.1| PREDICTED: DNA repair and recombination prot...   114   1e-23

>ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Glycine max]
          Length = 883

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/117 (50%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
 Frame = -2

Query: 348 DIWKEMTEALQCSKGATKD-SVEHTDNKGNGCDHSFVLKDDLGYVCRICGVINKCIETIF 172
           DIWKEM+ A++CSK  ++D   E  + + + CDHSFVLKDDLGYVCR+CGVI++ IETIF
Sbjct: 241 DIWKEMSMAIECSKDVSEDPEPEEEEEEDDNCDHSFVLKDDLGYVCRVCGVIDRKIETIF 300

Query: 171 DFQWGKVSKTMRTYMYESRSTKEREECETAPFSEVHSAHDLAVFNISVHPRHMKQME 1
           +FQ+ KV ++ RTY  +S ++K + +     F    +  DL V +I+ HPRHMKQM+
Sbjct: 301 EFQY-KVKRSTRTYASDSWNSKGKADV----FGINVAEDDLVVTDIAAHPRHMKQMK 352


>emb|CBI38030.3| unnamed protein product [Vitis vinifera]
          Length = 856

 Score =  114 bits (286), Expect = 6e-24
 Identities = 59/116 (50%), Positives = 72/116 (62%)
 Frame = -2

Query: 348 DIWKEMTEALQCSKGATKDSVEHTDNKGNGCDHSFVLKDDLGYVCRICGVINKCIETIFD 169
           D+W+E   ALQ SK    D  E        C+HSFVLKDD+G VCRICGV+NK IETI +
Sbjct: 286 DMWQEFDLALQSSKDVAVDPGEDEKESKEECEHSFVLKDDIGSVCRICGVVNKSIETIIE 345

Query: 168 FQWGKVSKTMRTYMYESRSTKEREECETAPFSEVHSAHDLAVFNISVHPRHMKQME 1
           +Q+ KV K  RTYMYE R+TK+RE  +        S H+L V  I  HPRH  QM+
Sbjct: 346 YQYTKV-KRSRTYMYEPRNTKDREPTDDPSDGLGFSEHNLTVTEIHAHPRHSMQMK 400


>ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
           vinifera]
          Length = 903

 Score =  114 bits (286), Expect = 6e-24
 Identities = 59/116 (50%), Positives = 72/116 (62%)
 Frame = -2

Query: 348 DIWKEMTEALQCSKGATKDSVEHTDNKGNGCDHSFVLKDDLGYVCRICGVINKCIETIFD 169
           D+W+E   ALQ SK    D  E        C+HSFVLKDD+G VCRICGV+NK IETI +
Sbjct: 244 DMWQEFDLALQSSKDVAVDPGEDEKESKEECEHSFVLKDDIGSVCRICGVVNKSIETIIE 303

Query: 168 FQWGKVSKTMRTYMYESRSTKEREECETAPFSEVHSAHDLAVFNISVHPRHMKQME 1
           +Q+ KV K  RTYMYE R+TK+RE  +        S H+L V  I  HPRH  QM+
Sbjct: 304 YQYTKV-KRSRTYMYEPRNTKDREPTDDPSDGLGFSEHNLTVTEIHAHPRHSMQMK 358


>emb|CBI15777.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/116 (50%), Positives = 71/116 (61%)
 Frame = -2

Query: 348 DIWKEMTEALQCSKGATKDSVEHTDNKGNGCDHSFVLKDDLGYVCRICGVINKCIETIFD 169
           D+W+E   ALQ SK    D  E        C+HSFVLKDD+G VCRICGV+NK IETI +
Sbjct: 245 DMWQEFDLALQSSKDVAVDPEEDGKEGEEECEHSFVLKDDIGSVCRICGVVNKSIETIIE 304

Query: 168 FQWGKVSKTMRTYMYESRSTKEREECETAPFSEVHSAHDLAVFNISVHPRHMKQME 1
           +Q+ KV K  RTYMYE R+TK+RE  +        S H L V  I  HPRH  QM+
Sbjct: 305 YQYSKV-KRSRTYMYEPRNTKDREPTDDPSDGLRFSEHSLIVTEIHAHPRHSMQMK 359


>ref|XP_002275596.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
           vinifera]
          Length = 944

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/116 (50%), Positives = 71/116 (61%)
 Frame = -2

Query: 348 DIWKEMTEALQCSKGATKDSVEHTDNKGNGCDHSFVLKDDLGYVCRICGVINKCIETIFD 169
           D+W+E   ALQ SK    D  E        C+HSFVLKDD+G VCRICGV+NK IETI +
Sbjct: 285 DMWQEFDLALQSSKDVAVDPEEDGKEGEEECEHSFVLKDDIGSVCRICGVVNKSIETIIE 344

Query: 168 FQWGKVSKTMRTYMYESRSTKEREECETAPFSEVHSAHDLAVFNISVHPRHMKQME 1
           +Q+ KV K  RTYMYE R+TK+RE  +        S H L V  I  HPRH  QM+
Sbjct: 345 YQYSKV-KRSRTYMYEPRNTKDREPTDDPSDGLRFSEHSLIVTEIHAHPRHSMQMK 399