BLASTX nr result

ID: Coptis21_contig00029126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029126
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271742.1| PREDICTED: UDP-N-acetylmuramoyl-tripeptide--...    75   4e-12
emb|CBI35373.3| unnamed protein product [Vitis vinifera]               75   4e-12

>ref|XP_002271742.1| PREDICTED: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine
           ligase-like [Vitis vinifera]
          Length = 771

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 43/88 (48%), Positives = 52/88 (59%)
 Frame = +1

Query: 1   VLFGRRMGCDIRLVSAESTDGGCGVQVVLARNAEMVEFVIHSPGXXXXXXXXXXXXXXXX 180
           VLFG+R+ CD+R  +AE   GG GV+VVL RN E VEFVI SPG                
Sbjct: 547 VLFGQRLECDVRF-AAEKVHGGHGVRVVLERNHEKVEFVIPSPGLHLAQNACATAAVAVA 605

Query: 181 XXXXXPQFALSISRFTPVHMRSELDVAE 264
                PQ  +S+SRF PV MRSEL+VA+
Sbjct: 606 LGVSLPQVGISLSRFIPVSMRSELEVAK 633


>emb|CBI35373.3| unnamed protein product [Vitis vinifera]
          Length = 510

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 43/88 (48%), Positives = 52/88 (59%)
 Frame = +1

Query: 1   VLFGRRMGCDIRLVSAESTDGGCGVQVVLARNAEMVEFVIHSPGXXXXXXXXXXXXXXXX 180
           VLFG+R+ CD+R  +AE   GG GV+VVL RN E VEFVI SPG                
Sbjct: 286 VLFGQRLECDVRF-AAEKVHGGHGVRVVLERNHEKVEFVIPSPGLHLAQNACATAAVAVA 344

Query: 181 XXXXXPQFALSISRFTPVHMRSELDVAE 264
                PQ  +S+SRF PV MRSEL+VA+
Sbjct: 345 LGVSLPQVGISLSRFIPVSMRSELEVAK 372


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