BLASTX nr result

ID: Coptis21_contig00029117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029117
         (1322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283833.1| PREDICTED: uncharacterized protein LOC100248...   242   1e-61
gb|ACJ06699.1| putative anti-virus transcriptional factor [Vitis...   242   2e-61
gb|ADD16956.1| C4C4-type RING finger protein [Vitis pseudoreticu...   234   4e-59
gb|ACJ06697.1| putative anti-virus transcriptional factor [Vitis...   234   5e-59
gb|ACJ06698.1| putative anti-virus transcriptional factor [Vitis...   233   1e-58

>ref|XP_002283833.1| PREDICTED: uncharacterized protein LOC100248510 [Vitis vinifera]
          Length = 348

 Score =  242 bits (618), Expect = 1e-61
 Identities = 148/337 (43%), Positives = 185/337 (54%), Gaps = 14/337 (4%)
 Frame = -2

Query: 1147 ARDYGKKKRTNNRLAKLKQCKLDARREQWLSQAKNK------ESV-DGSVSPRHVISEEN 989
            ++++GKKKRTN R AKLKQCKLDARREQWLS+ KN       E + + S+  R+  +E N
Sbjct: 14   SKEFGKKKRTN-RTAKLKQCKLDARREQWLSKVKNNGCRGESEGIPESSMHKRNESNESN 72

Query: 988  GQMENSEIGSRREENDGSSIHESDLESLANCSVS-----TDSRKDRPRXXXXXXXXXXXX 824
              +EN E+  R  ENDGS  H+SD ES AN   S       S                  
Sbjct: 73   RSLENLEVRPRGGENDGSVHHDSDSESPANSPTSHISSILGSTDSGTNYHASSSSSSSSG 132

Query: 823  XXXXGNFSXXXXXXXXXXXXXXXETVADALTADEKQHSKDSEPLSEQVTRVEPPEAQPKV 644
                G+ +               E VADAL A +KQ     E   EQ + VE        
Sbjct: 133  GCCSGSITEEEEEEGNDECLDDWEAVADALAAVDKQKIPVQEGHVEQESHVEQKPVVRSG 192

Query: 643  VNKTIGVDVSKPVDIPKSECKNLTPQPAPDNRAWKRDDAFRPQSLPNLSKQYSFTKNAGR 464
                I  D    ++I K E   + P+   + +AW+ DDAFRPQSLPNLSKQ+SF  N+ R
Sbjct: 193  SPGGISKDTGLGIEIHKPEHVGMVPRAPANGQAWRADDAFRPQSLPNLSKQHSFPMNSDR 252

Query: 463  HLVHGSDICIRNIAVSLPSSCPICYEDLDVTDSSFRPCICGFKLCLFCHNRIFEVGDGRC 284
            H  HG     R+   ++P SCPICYEDLD TDSSF PC CGF+LCLFCH RI E  DGRC
Sbjct: 253  HYGHGGVPWARSSVAAIPISCPICYEDLDFTDSSFLPCSCGFRLCLFCHKRILE-EDGRC 311

Query: 283  PGCRRPY--DPIDANGVVIGIEQSFQLARSSSISERS 179
            PGCR+PY  DP++A  +V G   +F+L RS S+  RS
Sbjct: 312  PGCRKPYDCDPVEAEAIVNGGSLTFRLGRSYSMIARS 348


>gb|ACJ06699.1| putative anti-virus transcriptional factor [Vitis pseudoreticulata]
          Length = 348

 Score =  242 bits (617), Expect = 2e-61
 Identities = 148/337 (43%), Positives = 183/337 (54%), Gaps = 14/337 (4%)
 Frame = -2

Query: 1147 ARDYGKKKRTNNRLAKLKQCKLDARREQWLSQAKN-------KESVDGSVSPRHVISEEN 989
            ++++GKKKRTN R AKLKQCKLDARREQWLS+ KN       K   + S+  R+  +E N
Sbjct: 14   SKEFGKKKRTN-RTAKLKQCKLDARREQWLSKVKNNGCRGESKGIPESSMHKRNESNESN 72

Query: 988  GQMENSEIGSRREENDGSSIHESDLESLANCSVS-----TDSRKDRPRXXXXXXXXXXXX 824
              +EN E+  R  ENDGS  H+SD ES AN   S       S                  
Sbjct: 73   RSLENLEVRPRGGENDGSVHHDSDSESPANSPTSHISSILGSTDSGTNYHASSSSSSSSG 132

Query: 823  XXXXGNFSXXXXXXXXXXXXXXXETVADALTADEKQHSKDSEPLSEQVTRVEPPEAQPKV 644
                G+ +               E VADAL A +KQ     E   EQ + VE        
Sbjct: 133  GCCSGSITEEEEEEGNDECLDDWEAVADALAAVDKQKIPVQEGHVEQESHVEQKPVVRSG 192

Query: 643  VNKTIGVDVSKPVDIPKSECKNLTPQPAPDNRAWKRDDAFRPQSLPNLSKQYSFTKNAGR 464
                I  D    ++I K E   + P+   + +AW+ DDAFRPQSLPNLSKQ+SF  N+ R
Sbjct: 193  SPGGISKDTGLGIEIHKPEHVGMVPRAPANGQAWRADDAFRPQSLPNLSKQHSFPMNSDR 252

Query: 463  HLVHGSDICIRNIAVSLPSSCPICYEDLDVTDSSFRPCICGFKLCLFCHNRIFEVGDGRC 284
            H  HG     R+   ++P SCPICYEDLD TDSSF PC CGF LCLFCH RI E  DGRC
Sbjct: 253  HYGHGGVPWARSSVAAIPISCPICYEDLDFTDSSFLPCSCGFHLCLFCHKRILE-EDGRC 311

Query: 283  PGCRRPY--DPIDANGVVIGIEQSFQLARSSSISERS 179
            PGCR+PY  DP++A  +V G   +F+L RS S+  RS
Sbjct: 312  PGCRKPYDCDPVEAEAIVNGGSLTFRLGRSYSMIARS 348


>gb|ADD16956.1| C4C4-type RING finger protein [Vitis pseudoreticulata]
          Length = 350

 Score =  234 bits (597), Expect = 4e-59
 Identities = 148/340 (43%), Positives = 182/340 (53%), Gaps = 17/340 (5%)
 Frame = -2

Query: 1147 ARDYGKKKRTNNRLAKLKQCKLDARREQWLSQAKNK------ESV-DGSVSPRHVISEEN 989
            ++++GKKKRTN R AKLKQCKLDARREQWLS+ KN       E + + S+  R+  +E N
Sbjct: 14   SKEFGKKKRTN-RTAKLKQCKLDARREQWLSKVKNNGCRGESEGIPESSMHKRNESNEIN 72

Query: 988  GQMENSEIGSRREENDGSSIHESDLESLANCSVS--------TDSRKDRPRXXXXXXXXX 833
              +EN E+  R  ENDGS  H+SD ES AN   S        TDS  +            
Sbjct: 73   RSLENLEVRPRGGENDGSVHHDSDSESPANSPTSHISSILGSTDSGTNYHASSSSSSSSG 132

Query: 832  XXXXXXXGNFSXXXXXXXXXXXXXXXETVADALTADEKQHSKDSEPLSEQVTRVEPPEAQ 653
                                      E VADAL A +KQ     E   EQ + VE     
Sbjct: 133  GCCSGSITE-EEEEEEEGNDECLDDWEAVADALAAVDKQKIPVQEGHVEQESHVEQKPVV 191

Query: 652  PKVVNKTIGVDVSKPVDIPKSECKNLTPQPAPDNRAWKRDDAFRPQSLPNLSKQYSFTKN 473
                   I  D    ++I K E   + P+   + +AW+ DDAFRPQSLPNLSKQ SF  N
Sbjct: 192  RSGSPGGISKDTGLGIEIHKPEHVGMVPRAPANGQAWRADDAFRPQSLPNLSKQQSFPMN 251

Query: 472  AGRHLVHGSDICIRNIAVSLPSSCPICYEDLDVTDSSFRPCICGFKLCLFCHNRIFEVGD 293
            + RH  HG     R+   ++P SCPICYEDLD TDSSF PC C F+LCLFCH RI E  D
Sbjct: 252  SDRHYGHGGVPWARSSVAAIPISCPICYEDLDFTDSSFLPCSCAFRLCLFCHKRILE-ED 310

Query: 292  GRCPGCRRPY--DPIDANGVVIGIEQSFQLARSSSISERS 179
            GRCPGCR+PY  DP+ A  +V G   +F+L RS S+  RS
Sbjct: 311  GRCPGCRKPYDCDPVGAEAIVNGGSLTFRLGRSYSMIARS 350


>gb|ACJ06697.1| putative anti-virus transcriptional factor [Vitis pseudoreticulata]
          Length = 350

 Score =  234 bits (596), Expect = 5e-59
 Identities = 147/340 (43%), Positives = 183/340 (53%), Gaps = 17/340 (5%)
 Frame = -2

Query: 1147 ARDYGKKKRTNNRLAKLKQCKLDARREQWLSQAKNK------ESV-DGSVSPRHVISEEN 989
            ++++GKKKRTN R AKLKQCKLDARREQWLS+ KN       E + + S+  R+  +E N
Sbjct: 14   SKEFGKKKRTN-RTAKLKQCKLDARREQWLSKVKNNGCRGESEGIPESSMHKRNESNEIN 72

Query: 988  GQMENSEIGSRREENDGSSIHESDLESLANCSVS--------TDSRKDRPRXXXXXXXXX 833
              +EN E+  R  ENDGS  H+SD ES AN   S        TDS  +            
Sbjct: 73   RSLENLEVRPRGGENDGSVHHDSDSESPANSPTSHISSILGSTDSGTNYHASSSSSSSSG 132

Query: 832  XXXXXXXGNFSXXXXXXXXXXXXXXXETVADALTADEKQHSKDSEPLSEQVTRVEPPEAQ 653
                                      E VADAL A +KQ     E   E+ + VE     
Sbjct: 133  GCCSGSITE-EEEEEEEGNDECLDDWEAVADALAAVDKQKIPVQEGHVERESHVEQKPVV 191

Query: 652  PKVVNKTIGVDVSKPVDIPKSECKNLTPQPAPDNRAWKRDDAFRPQSLPNLSKQYSFTKN 473
                   I  D    ++I K E   + P+   + +AW+ DDAFRPQSLPNLSKQ+SF  N
Sbjct: 192  RSGSPGGISKDTGLGIEIHKPEHVGMVPRAPANGQAWRADDAFRPQSLPNLSKQHSFPMN 251

Query: 472  AGRHLVHGSDICIRNIAVSLPSSCPICYEDLDVTDSSFRPCICGFKLCLFCHNRIFEVGD 293
            + RH  HG     R+   ++P SCPICYEDLD TDSSF PC C F+LCLFCH RI E  D
Sbjct: 252  SDRHYGHGGVPWARSSVAAIPISCPICYEDLDFTDSSFLPCSCAFRLCLFCHKRILE-ED 310

Query: 292  GRCPGCRRPY--DPIDANGVVIGIEQSFQLARSSSISERS 179
            GRCPGCR+PY  DP+ A  +V G   +F+L RS S+  RS
Sbjct: 311  GRCPGCRKPYDCDPVGAEAIVNGGSLTFRLGRSYSMIARS 350


>gb|ACJ06698.1| putative anti-virus transcriptional factor [Vitis pseudoreticulata]
          Length = 349

 Score =  233 bits (593), Expect = 1e-58
 Identities = 146/340 (42%), Positives = 183/340 (53%), Gaps = 17/340 (5%)
 Frame = -2

Query: 1147 ARDYGKKKRTNNRLAKLKQCKLDARREQWLSQAKNK------ESV-DGSVSPRHVISEEN 989
            ++++GKKKRTN R AKLKQCKLDARREQWLS+ KN       E + + S+  R+  +E N
Sbjct: 14   SKEFGKKKRTN-RTAKLKQCKLDARREQWLSKVKNNGCGGESEGIPESSMHKRNESNESN 72

Query: 988  GQMENSEIGSRREENDGSSIHESDLESLANCSVS--------TDSRKDRPRXXXXXXXXX 833
              +EN E+  R  ENDGS  H+SD ES AN   S        TDS  +            
Sbjct: 73   RSLENLEVRPRGGENDGSVHHDSDSESPANSPTSHISSILGSTDSGTNYHASSSSSSSSG 132

Query: 832  XXXXXXXGNFSXXXXXXXXXXXXXXXETVADALTADEKQHSKDSEPLSEQVTRVEPPEAQ 653
                                      E VADAL A +KQ     E   EQ + VE     
Sbjct: 133  GCCSGSITE--EEEEEEGNDECLDDWEAVADALAAVDKQKIPVQEGHVEQESHVEQKPVV 190

Query: 652  PKVVNKTIGVDVSKPVDIPKSECKNLTPQPAPDNRAWKRDDAFRPQSLPNLSKQYSFTKN 473
                   I  D    ++I K E   + P+   + +AW+ DDAFRPQSLPNLSKQ+SF  N
Sbjct: 191  RSGSPGGISKDTGLGIEIHKPEHVGMVPRAPANGQAWRADDAFRPQSLPNLSKQHSFPVN 250

Query: 472  AGRHLVHGSDICIRNIAVSLPSSCPICYEDLDVTDSSFRPCICGFKLCLFCHNRIFEVGD 293
            + RH  HG     R+   ++P SCPICYEDLD TDSSF PC C F+LCLFCH RI E  D
Sbjct: 251  SDRHYGHGGVPWARSSVAAIPISCPICYEDLDFTDSSFLPCSCAFRLCLFCHKRILE-ED 309

Query: 292  GRCPGCRRPY--DPIDANGVVIGIEQSFQLARSSSISERS 179
             RCPGCR+PY  DP++A  +V G   +F+L RS ++  RS
Sbjct: 310  ERCPGCRKPYDCDPVEAEAIVNGGSLTFRLGRSYNMIARS 349


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