BLASTX nr result

ID: Coptis21_contig00029103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029103
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34394.1| Mutator transposable element-related protein, put...    89   5e-16
gb|AAT40523.2| Mutator transposable element, putative [Solanum d...    80   1e-13
ref|XP_004157051.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    70   2e-10
ref|XP_004138593.1| PREDICTED: uncharacterized protein LOC101203...    70   2e-10
gb|AAX93020.1| transposon protein, putative, mutator sub-class [...    70   2e-10

>gb|ABI34394.1| Mutator transposable element-related protein, putative [Solanum
           tuberosum]
          Length = 616

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
 Frame = -3

Query: 367 RSHFDRTATSDHLSNNFTEAWNSYILDARDKPIAKMISKILMLQMKILYQRKVKSELWED 188
           RSH    A  D L NN  E +NS I DARDKPI  ++ K+  L M  +   + K+  W  
Sbjct: 118 RSHLSSDAKCDILLNNICEVFNSMIFDARDKPIVTLLEKLRYLLMARMLANREKAHKWSS 177

Query: 187 DDLVPRVKELISKRCEDIKDYDVAGADNNKFCVSWNATH-WWTVDLDTHECTCNEWQVTG 11
           +D+ P++K+++ K      +Y    ++  K+ +     H  W VDL+   C+C +W + G
Sbjct: 178 NDVCPKIKDILHKNQTAAGEYIPRKSNQRKYEIIGATIHDSWAVDLENRICSCTKWSIMG 237

Query: 10  IPC 2
           IPC
Sbjct: 238 IPC 240


>gb|AAT40523.2| Mutator transposable element, putative [Solanum demissum]
          Length = 626

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
 Frame = -3

Query: 367 RSHFDRTATSDHLSNNFTEAWNSYILDARDKPIAKMISKILMLQMKILYQRKVKSELWED 188
           RSHF      D L NN  E +N +ILDARDKPI K++  I  L M  +   + K+E W  
Sbjct: 430 RSHFSPLPKCDILLNNQCEVFNKFILDARDKPIVKLLETIRHLLMTRINSIREKAEKWNL 489

Query: 187 DDLVPRVKELISKRCEDIKDYDVAGADN--NKFCVSWNATHWWTVDLDTHECTCNEWQVT 14
           +D+ P +K+ ++K  +   +Y +    N  N   +       W VDL    C+C +W+++
Sbjct: 490 NDICPTIKKKLAKTMKKAANY-IPQRSNMWNYEVIGPVEGDNWAVDLYNRTCSCRQWELS 548

Query: 13  GIPC 2
           G+PC
Sbjct: 549 GVPC 552


>ref|XP_004157051.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101228329 [Cucumis sativus]
          Length = 844

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/115 (31%), Positives = 65/115 (56%)
 Frame = -3

Query: 346 ATSDHLSNNFTEAWNSYILDARDKPIAKMISKILMLQMKILYQRKVKSELWEDDDLVPRV 167
           A  +H+++NF + + S I +A + PI +MI  +    M+ +Y R+V+S+ W    L P  
Sbjct: 632 ARYNHITSNFGQQFYSSISEAHELPITQMIDVLRGKMMETIYSRRVESDQWV-TKLTPTN 690

Query: 166 KELISKRCEDIKDYDVAGADNNKFCVSWNATHWWTVDLDTHECTCNEWQVTGIPC 2
           +E + K     + + V+ +  N F V   +   ++VD+D  +C+C  WQ+TG+PC
Sbjct: 691 EEKLQKEISIARSFQVSLSHGNIFEVRGESV--YSVDVDNWDCSCKAWQLTGLPC 743


>ref|XP_004138593.1| PREDICTED: uncharacterized protein LOC101203713 [Cucumis sativus]
          Length = 850

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/115 (31%), Positives = 65/115 (56%)
 Frame = -3

Query: 346 ATSDHLSNNFTEAWNSYILDARDKPIAKMISKILMLQMKILYQRKVKSELWEDDDLVPRV 167
           A  +H+++NF + + S I +A + PI +MI  +    M+ +Y R+V+S+ W    L P  
Sbjct: 638 ARYNHITSNFGQQFYSSISEAHELPITQMIDVLRGKMMETIYSRRVESDQWV-TKLTPTN 696

Query: 166 KELISKRCEDIKDYDVAGADNNKFCVSWNATHWWTVDLDTHECTCNEWQVTGIPC 2
           +E + K     + + V+ +  N F V   +   ++VD+D  +C+C  WQ+TG+PC
Sbjct: 697 EEKLQKEISIARSFQVSLSHGNIFEVRGESV--YSVDVDNWDCSCKAWQLTGLPC 749


>gb|AAX93020.1| transposon protein, putative, mutator sub-class [Oryza sativa
           Japonica Group] gi|62732961|gb|AAX95080.1| transposon
           protein, putative, mutator sub-class [Oryza sativa
           Japonica Group] gi|77548842|gb|ABA91639.1| transposon
           protein, putative, Mutator sub-class [Oryza sativa
           Japonica Group]
          Length = 898

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 43/122 (35%), Positives = 59/122 (48%)
 Frame = -3

Query: 367 RSHFDRTATSDHLSNNFTEAWNSYILDARDKPIAKMISKILMLQMKILYQRKVKSELWED 188
           R+ F      D L NN  E +N YILDAR+ PI  M+ +I    M  LY ++ + E    
Sbjct: 576 RAFFSDFPKCDILLNNNLEVFNKYILDAREMPILSMLERIRNQIMNRLYTKQKELERNWP 635

Query: 187 DDLVPRVKELISKRCEDIKDYDVAGADNNKFCVSWNATHWWTVDLDTHECTCNEWQVTGI 8
             L P++K  + K  E      V  A    F VS   +  + V+L+   C C  WQ+TGI
Sbjct: 636 CGLCPKIKRKVEKNTEIANTCYVLPAGMGAFQVSDRGSQ-YIVELNVKRCDCRRWQLTGI 694

Query: 7   PC 2
           PC
Sbjct: 695 PC 696


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