BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029100
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...   246   3e-63
emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]   246   3e-63
ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|2...   240   2e-61
ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containi...   220   2e-55
ref|XP_003627527.1| Pentatricopeptide repeat-containing protein ...   218   8e-55

>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score =  246 bits (628), Expect = 3e-63
 Identities = 120/183 (65%), Positives = 141/183 (77%)
 Frame = -3

Query: 651 LLACTHGGLVRDAWKFFESMHKDFCITPKLQHYGCMVDLLGRAGFLNEAYGLLKKMPMKP 472
           LLACTHGG+V +   FFESM +DF I PKL+HYGCMVDLLGRAG L EA+ L+ +MPM+P
Sbjct: 324 LLACTHGGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEP 383

Query: 471 DAVVWGALLGACSFHGNVKXXXXXXXXXXXXEPRNPGIYVILSNVYASRGRWDGVAKVRK 292
           D+VVWG LLGACSFHG+V+            EP NPG YVILSN+YA+ GRWDGVA++RK
Sbjct: 384 DSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAGRWDGVARLRK 443

Query: 291 LMKGNQFTKAVGYSFIEVDGIVHKFFVEDRSHPRSDEVYALLDEILCRMKLLCLESDLDS 112
           LMKG + TKA GYSFIE  G +HKF VEDRSH RSDE+YALLDE+  +MKL    +D DS
Sbjct: 444 LMKGGKITKAAGYSFIEEGGHIHKFIVEDRSHSRSDEIYALLDEVSMKMKLHGNVNDSDS 503

Query: 111 EIE 103
           EIE
Sbjct: 504 EIE 506


>emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
          Length = 967

 Score =  246 bits (628), Expect = 3e-63
 Identities = 120/183 (65%), Positives = 141/183 (77%)
 Frame = -3

Query: 651  LLACTHGGLVRDAWKFFESMHKDFCITPKLQHYGCMVDLLGRAGFLNEAYGLLKKMPMKP 472
            LLACTHGG+V +   FFESM +DF I PKL+HYGCMVDLLGRAG L EA+ L+ +MPM+P
Sbjct: 779  LLACTHGGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEP 838

Query: 471  DAVVWGALLGACSFHGNVKXXXXXXXXXXXXEPRNPGIYVILSNVYASRGRWDGVAKVRK 292
            D+VVWG LLGACSFHG+V+            EP NPG YVILSN+YA+ GRWDGVA++RK
Sbjct: 839  DSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAGRWDGVARLRK 898

Query: 291  LMKGNQFTKAVGYSFIEVDGIVHKFFVEDRSHPRSDEVYALLDEILCRMKLLCLESDLDS 112
            LMKG + TKA GYSFIE  G +HKF VEDRSH RSDE+YALLDE+  +MKL    +D DS
Sbjct: 899  LMKGGKITKAAGYSFIEEGGHIHKFIVEDRSHSRSDEIYALLDEVSMKMKLHGNVNDSDS 958

Query: 111  EIE 103
            EIE
Sbjct: 959  EIE 961


>ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|222843153|gb|EEE80700.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  240 bits (612), Expect = 2e-61
 Identities = 116/183 (63%), Positives = 134/183 (73%)
 Frame = -3

Query: 651 LLACTHGGLVRDAWKFFESMHKDFCITPKLQHYGCMVDLLGRAGFLNEAYGLLKKMPMKP 472
           +LACTHGGLV   W+ F+SM  +F I PKL+HYGCMVDLLGRAG L EAY L+K MPMKP
Sbjct: 252 ILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEAYDLVKSMPMKP 311

Query: 471 DAVVWGALLGACSFHGNVKXXXXXXXXXXXXEPRNPGIYVILSNVYASRGRWDGVAKVRK 292
           D+V+WG LLGACSFH NV+            EP NPG YVIL N+YAS  RWDGVAK+RK
Sbjct: 312 DSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNPGNYVILCNIYASAQRWDGVAKLRK 371

Query: 291 LMKGNQFTKAVGYSFIEVDGIVHKFFVEDRSHPRSDEVYALLDEILCRMKLLCLESDLDS 112
           LMKG Q TKA GYS IE +G +HKF VED+SHPR  E+YALL+EI  +MKL   E D   
Sbjct: 372 LMKGGQITKAAGYSVIEGEGEIHKFIVEDKSHPRHYEIYALLNEISTKMKLQITEDDFKP 431

Query: 111 EIE 103
           E+E
Sbjct: 432 ELE 434


>ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Glycine max]
          Length = 512

 Score =  220 bits (560), Expect = 2e-55
 Identities = 106/171 (61%), Positives = 130/171 (76%)
 Frame = -3

Query: 651 LLACTHGGLVRDAWKFFESMHKDFCITPKLQHYGCMVDLLGRAGFLNEAYGLLKKMPMKP 472
           LLACTHGG+V      F+SM   F I PKL+HYGCMVDLLGRAG L EAY ++++MPMKP
Sbjct: 325 LLACTHGGMVEKGRHIFKSMTTSFNIIPKLEHYGCMVDLLGRAGQLREAYEVIQRMPMKP 384

Query: 471 DAVVWGALLGACSFHGNVKXXXXXXXXXXXXEPRNPGIYVILSNVYASRGRWDGVAKVRK 292
           D+V+WGALLGACSFH NV+            EP NPG YVILSN+YAS G+WDGVAK+RK
Sbjct: 385 DSVIWGALLGACSFHDNVELAEIAAESLFALEPWNPGNYVILSNIYASAGQWDGVAKLRK 444

Query: 291 LMKGNQFTKAVGYSFIEVDGIVHKFFVEDRSHPRSDEVYALLDEILCRMKL 139
           +MKG++ TK+ G+SFIE  G +HKF VEDRSHP S+E++ALLD +   +KL
Sbjct: 445 VMKGSKITKSAGHSFIEEGGQLHKFIVEDRSHPESNEIFALLDGVYEMIKL 495


>ref|XP_003627527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355521549|gb|AET02003.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  218 bits (555), Expect = 8e-55
 Identities = 104/165 (63%), Positives = 125/165 (75%)
 Frame = -3

Query: 651 LLACTHGGLVRDAWKFFESMHKDFCITPKLQHYGCMVDLLGRAGFLNEAYGLLKKMPMKP 472
           LLACTHGG+V      F+SM +DF I PKL+HYGCMVDLLGRAG L EAY ++K+MPMKP
Sbjct: 365 LLACTHGGMVEKGKHVFQSMTRDFNIIPKLEHYGCMVDLLGRAGRLTEAYEVIKRMPMKP 424

Query: 471 DAVVWGALLGACSFHGNVKXXXXXXXXXXXXEPRNPGIYVILSNVYASRGRWDGVAKVRK 292
           D+V+WG LLGACSFHGNV+            EP NPG YVILSN+YAS G+WDGVAK+RK
Sbjct: 425 DSVIWGTLLGACSFHGNVELAEVAAESLFVLEPWNPGNYVILSNIYASAGKWDGVAKLRK 484

Query: 291 LMKGNQFTKAVGYSFIEVDGIVHKFFVEDRSHPRSDEVYALLDEI 157
           +MKG++ TK  G SFIE  G +HKF VEDRSH  S E++ALL+ +
Sbjct: 485 VMKGSKITKTAGQSFIEEGGQLHKFIVEDRSHSESSEIFALLNGV 529