BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029097
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    80   2e-13
dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidop...    77   1e-12
dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like ...    77   1e-12
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    77   2e-12
ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12

>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/103 (40%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
 Frame = -1

Query: 392  GDDHILWTATTKGDFN----LKETYENIREXXXXXXXXXXXWFPNRVPRHSFIAWLTFQE 225
            G D  LW +  K DFN     K T+ N+R            WFP   P++SF+ WLT Q 
Sbjct: 1319 GPDISLWRSL-KNDFNKRFITKVTWNNVRTHQPQQNWYKGVWFPYSTPKYSFLLWLTVQN 1377

Query: 224  GLKTLVRLKEWNQVQDDTCVICGAGSETESHLFFECAYAQFVW 96
             L T  R+K WN  Q  TC +C    ET  HLFF C Y  +VW
Sbjct: 1378 RLSTGDRIKAWNSGQLVTCTLCNNAEETRDHLFFSCQYTSYVW 1420


>dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidopsis thaliana]
          Length = 278

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/119 (35%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
 Frame = -1

Query: 386 DHILWTA---TTKGDFNLKETYENIREXXXXXXXXXXXWFPNRVPRHSFIAWLTFQEGLK 216
           D  LW     + KG F+  +T++ IR            WFP+  P++SF+ WL F   L 
Sbjct: 78  DRSLWKQKEDSFKGSFSSPKTWQQIRTISNECEWYRGVWFPSSTPKYSFVTWLAFHNRLA 137

Query: 215 TLVRLKEWNQVQDDTCVICGAGSETESHLFFECAYAQFVWMYVLKYAGYNRVRATSWQL 39
           T  RL +WN     TCV C    ET  HLFF C Y+  +W+ + K    N    +SW L
Sbjct: 138 TGDRLYKWNSEARATCVFCDEELETRDHLFFSCPYSSQIWIALAK-GLLNGRNVSSWSL 195


>dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 637

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/119 (35%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
 Frame = -1

Query: 386 DHILWTA---TTKGDFNLKETYENIREXXXXXXXXXXXWFPNRVPRHSFIAWLTFQEGLK 216
           D  LW     + KG F+  +T++ IR            WFP+  P++SF+ WL F   L 
Sbjct: 246 DRSLWKQKEDSFKGSFSSPKTWQQIRTISNECEWYRGVWFPSSTPKYSFVTWLAFHNRLA 305

Query: 215 TLVRLKEWNQVQDDTCVICGAGSETESHLFFECAYAQFVWMYVLKYAGYNRVRATSWQL 39
           T  RL +WN     TCV C    ET  HLFF C Y+  +W+ + K    N    +SW L
Sbjct: 306 TGDRLYKWNSEARATCVFCDEELETRDHLFFSCPYSSQIWIALAK-GLLNGRNVSSWSL 363


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
 Frame = -1

Query: 389  DDHILWTATT---KGDFNLKETYENIREXXXXXXXXXXXWFPNRVPRHSFIAWLTFQEGL 219
            +D ILW       K  F+ K+T+ +IR            WF +  P+ SF AWL  +  L
Sbjct: 744  EDAILWRGKEDVFKARFSTKDTWNHIRTSSNQRAWHKGVWFAHATPKFSFCAWLAIRNRL 803

Query: 218  KTLVRLKEWNQVQDDTCVICGAGSETESHLFFECAYAQFVWMYVLKYAGYNRVRATSWQL 39
             T  R+  WN     TCV C +  ET  HLFF+C Y+  +W  + K    +R  +T W  
Sbjct: 804  STGDRMMTWNNGTPTTCVFCSSPMETRDHLFFQCCYSSEIWTSIAKNVYKDRF-STKWSA 862

Query: 38   EIEWV 24
             + ++
Sbjct: 863  VVNYI 867


>ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1|
            predicted protein [Populus trichocarpa]
          Length = 949

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 31/97 (31%), Positives = 51/97 (52%)
 Frame = -1

Query: 386  DHILWTATTKGDFNLKETYENIREXXXXXXXXXXXWFPNRVPRHSFIAWLTFQEGLKTLV 207
            D+  W   + G+F++   +E +R+           WF   +PR +FI W+   + L T+ 
Sbjct: 752  DYYTWPGHSSGNFSIDSAWELLRDSRPLDSLYHLIWFKGHIPRQAFILWIASMDRLHTMD 811

Query: 206  RLKEWNQVQDDTCVICGAGSETESHLFFECAYAQFVW 96
            RL  +  +   TCV+CG  +ET  HLFF+C Y+  +W
Sbjct: 812  RLTSFGIIPSSTCVLCGMHNETHDHLFFQCTYSSILW 848