BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029093
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    89   9e-16
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    88   1e-15
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    86   6e-15
ref|XP_002532278.1| conserved hypothetical protein [Ricinus comm...    85   1e-14
ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm...    80   2e-13

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 88.6 bits (218), Expect = 9e-16
 Identities = 55/146 (37%), Positives = 71/146 (48%), Gaps = 21/146 (14%)
 Frame = +1

Query: 37  RIVAFDLASEEFRVVPSPSCVTPCKVNYELVQLGGCLCVTHYCSNGSLEIWMMKE---KS 207
           R+V+FDL  E+FR V  P C    + NY LV L GCL    YC+ G LEIW+MKE   K 
Sbjct: 255 RLVSFDLTDEQFREVSKPDCGGLNRCNYHLVVLRGCLSAAVYCNYGRLEIWVMKEYNVKE 314

Query: 208 YWTKEYTIAS------------------SSGFGTPYKPLALTKDGEVLLWRSGVVLLSYD 333
            W KEY I +                  +S  G     L + K+GE+LL     VL+SYD
Sbjct: 315 SWVKEYNIGAYMPKGLKQNQDRQLKIWKNSSNGRVVGALCVLKNGEILLEYKNRVLVSYD 374

Query: 334 PNTESLKVIKDHGNVSRLEAVTHMKS 411
           P     K I+  G  +  + V H+ S
Sbjct: 375 PKNGKFKDIELQGAPNWFQTVVHVGS 400


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 53/146 (36%), Positives = 70/146 (47%), Gaps = 21/146 (14%)
 Frame = +1

Query: 37  RIVAFDLASEEFRVVPSPSCVTPCKVNYELVQLGGCLCVTHYCSNGSLEIWMMKE---KS 207
           R+V+FDL  E+FR VP P C    + +Y L  L GCL V  YC+ G LEIW+MKE   K 
Sbjct: 254 RLVSFDLTDEQFREVPKPDCGGLNRCDYHLAVLRGCLSVAVYCNYGRLEIWVMKEYNVKE 313

Query: 208 YWTKEYTIAS------------------SSGFGTPYKPLALTKDGEVLLWRSGVVLLSYD 333
            W KEY I +                  ++  G   + L + K+GE+LL      L+SYD
Sbjct: 314 SWVKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRAVRALCVLKNGEILLEYKNRALVSYD 373

Query: 334 PNTESLKVIKDHGNVSRLEAVTHMKS 411
           P     K I   G     + V H+ S
Sbjct: 374 PKKGKFKDIDLQGTPKWFQTVVHVGS 399


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 85.9 bits (211), Expect = 6e-15
 Identities = 52/145 (35%), Positives = 73/145 (50%), Gaps = 21/145 (14%)
 Frame = +1

Query: 40  IVAFDLASEEFRVVPSPSCVTPCKVNYELVQLGGCLCVTHYCSNGSLEIWMMKE---KSY 210
           IV+FDLA E+FR +P P C    + NY L+ LGGCL    + SNG LE+W+MKE   K  
Sbjct: 255 IVSFDLADEQFREIPKPDCGGLSRCNYHLLVLGGCLSAAVHRSNGKLEVWVMKEYDVKES 314

Query: 211 WTKEYTIAS------------------SSGFGTPYKPLALTKDGEVLLWRSGVVLLSYDP 336
           W KE+ I +                  ++  G   + L L K+GE+LL   G VL+SY+P
Sbjct: 315 WIKEFNIGAHLPKGLKQDVNRPHRIWRNAPKGRGVRLLCLLKNGEILLEYKGRVLVSYNP 374

Query: 337 NTESLKVIKDHGNVSRLEAVTHMKS 411
                K +   G  +  +   H+ S
Sbjct: 375 ERGKFKDLTLKGLPNWFQTFVHVGS 399


>ref|XP_002532278.1| conserved hypothetical protein [Ricinus communis]
           gi|223528012|gb|EEF30093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 21/146 (14%)
 Frame = +1

Query: 37  RIVAFDLASEEFRVVPSPSCVTPCKVNYELVQLGGCLCVTHYCSNGSLEIWMMKE---KS 207
           R+V+ DL  E+FR VP P C    + NY LV L GCL    YC+ G LEIW MKE   K 
Sbjct: 108 RLVSLDLVDEQFREVPKPDCGGLSRCNYHLVVLKGCLSAAVYCNYGRLEIWTMKEYNVKE 167

Query: 208 YWTKEYTIAS------------------SSGFGTPYKPLALTKDGEVLLWRSGVVLLSYD 333
            W K+Y + +                  ++  G   + L L K+GE+LL     VL++YD
Sbjct: 168 SWVKQYIVGTHMPKGLKQNLERPTKIWKNASNGRVVRILGLLKNGELLLEYKSRVLVTYD 227

Query: 334 PNTESLKVIKDHGNVSRLEAVTHMKS 411
           PN    K +   G     +++ H+ S
Sbjct: 228 PNLGKFKDLTLQGLPKWFQSMVHVGS 253


>ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis]
           gi|223543465|gb|EEF44996.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 401

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 21/157 (13%)
 Frame = +1

Query: 40  IVAFDLASEEFRVVPSPSCVTPCKVNYELVQLGGCLCVTHYCSNGSLEIWMMK---EKSY 210
           IV+FDL +E+F+ VP P C    ++NY LV L GCL     C+ GS EIWMMK    K+ 
Sbjct: 244 IVSFDLETEQFQDVPRPGCGGLDQINYHLVTLRGCLSAIVSCNEGSNEIWMMKIYNVKAS 303

Query: 211 WTKEYTIAS-----------------SSGF-GTPYKPLALTKDGEVLLWRSGVVLLSYDP 336
           W KE  + +                  +G+ G  ++ L   K+GE+LL      ++SY+P
Sbjct: 304 WRKEMIVRNYVPQGLRLNTVPPARRRKNGYQGRRFRVLCDLKNGELLLLYGCRCIVSYNP 363

Query: 337 NTESLKVIKDHGNVSRLEAVTHMKSCVSLNAICGNPM 447
            T   K +   G      A  H  S +S+N + G  M
Sbjct: 364 ETGEFKELNFQGLPLEFLAFVHSGSLISVNTVFGMEM 400