BLASTX nr result

ID: Coptis21_contig00029084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029084
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874639.1| glutaredoxin family protein [Arabidopsis lyr...   110   1e-22
ref|XP_004143838.1| PREDICTED: uncharacterized protein At5g39865...   110   2e-22
gb|AEW69786.1| Hop-interacting protein THI143 [Solanum lycopersi...   105   5e-21
ref|XP_002272456.1| PREDICTED: uncharacterized protein At5g39865...   104   7e-21
emb|CAN76670.1| hypothetical protein VITISV_042863 [Vitis vinifera]   104   7e-21

>ref|XP_002874639.1| glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320476|gb|EFH50898.1| glutaredoxin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 325

 Score =  110 bits (275), Expect = 1e-22
 Identities = 65/111 (58%), Positives = 77/111 (69%), Gaps = 9/111 (8%)
 Frame = +2

Query: 20  KHFIGYSKENCDPNR--PIRLATS-VLKPFSFTA-PRLSYVKYSLD-----DFEKKCPPG 172
           K F G +KEN DPNR  P ++    VLKP    + P L   + SLD      FE+ CPPG
Sbjct: 109 KVFGGENKENSDPNRRNPRKILNDEVLKPLDPNSDPNLRNPRKSLDLKLDEKFERICPPG 168

Query: 173 GKNKVVIYTTTLRGVRKTFEACNAVRAATEGMGVVVNERDVSMHYGYREEL 325
           G+N+VV+YTT+LRGVR+TFEACNAVRAA E  GVVV ERDVSM  G+REEL
Sbjct: 169 GENRVVMYTTSLRGVRRTFEACNAVRAAVESFGVVVCERDVSMDRGFREEL 219


>ref|XP_004143838.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]
           gi|449527262|ref|XP_004170631.1| PREDICTED:
           uncharacterized protein At5g39865-like [Cucumis sativus]
          Length = 314

 Score =  110 bits (274), Expect = 2e-22
 Identities = 61/111 (54%), Positives = 76/111 (68%), Gaps = 9/111 (8%)
 Frame = +2

Query: 20  KHFIGYSKENCDPNRPIRLA-TSVLKPFSFTAPRL--------SYVKYSLDDFEKKCPPG 172
           K+ I  +KEN +PN P ++  +SVL+P S  A           S VK+ LD +E  CPP 
Sbjct: 93  KNDIDSNKENSNPNFPTQIVESSVLRPSSRPAAAAAAAPIAIPSPVKHLLDRYETLCPPS 152

Query: 173 GKNKVVIYTTTLRGVRKTFEACNAVRAATEGMGVVVNERDVSMHYGYREEL 325
           G+N+VV+YTTTLRG+RKTFE CNAVRAA EG GV + ERDVSM  G+REEL
Sbjct: 153 GENRVVVYTTTLRGIRKTFEECNAVRAAIEGAGVQICERDVSMDRGFREEL 203


>gb|AEW69786.1| Hop-interacting protein THI143 [Solanum lycopersicum]
          Length = 327

 Score =  105 bits (261), Expect = 5e-21
 Identities = 56/96 (58%), Positives = 68/96 (70%)
 Frame = +2

Query: 38  SKENCDPNRPIRLATSVLKPFSFTAPRLSYVKYSLDDFEKKCPPGGKNKVVIYTTTLRGV 217
           +KEN  PN P     ++ K   F   RLS     LD FE+ CPP G +K+VIYTTTLRGV
Sbjct: 127 NKENSSPNIP-SFTHALDKTDIFNPTRLSSASV-LDGFERICPPNGDDKIVIYTTTLRGV 184

Query: 218 RKTFEACNAVRAATEGMGVVVNERDVSMHYGYREEL 325
           RKTFEACNAVR+A EG+GV+ +ERD+SM  G+REEL
Sbjct: 185 RKTFEACNAVRSAIEGLGVLYSERDISMDKGFREEL 220


>ref|XP_002272456.1| PREDICTED: uncharacterized protein At5g39865 [Vitis vinifera]
          Length = 320

 Score =  104 bits (260), Expect = 7e-21
 Identities = 56/97 (57%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
 Frame = +2

Query: 38  SKENCDPNRP-IRLATSVLKPFSFTAPRLSYVKYSLDDFEKKCPPGGKNKVVIYTTTLRG 214
           +KEN +PNRP       VLKP + +  R       LD FE+ CPP G+N+VV+YTTTLRG
Sbjct: 116 NKENSNPNRPNCGDELRVLKPLNDSVLRQCLAL--LDGFERLCPPNGENRVVVYTTTLRG 173

Query: 215 VRKTFEACNAVRAATEGMGVVVNERDVSMHYGYREEL 325
           VRKTFE CNAVRAA EG+GV + ERD+SM  G++EEL
Sbjct: 174 VRKTFEDCNAVRAAIEGLGVSLCERDISMDRGFKEEL 210


>emb|CAN76670.1| hypothetical protein VITISV_042863 [Vitis vinifera]
          Length = 236

 Score =  104 bits (260), Expect = 7e-21
 Identities = 56/97 (57%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
 Frame = +2

Query: 38  SKENCDPNRP-IRLATSVLKPFSFTAPRLSYVKYSLDDFEKKCPPGGKNKVVIYTTTLRG 214
           +KEN +PNRP       VLKP + +  R       LD FE+ CPP G+N+VV+YTTTLRG
Sbjct: 32  NKENSNPNRPNCGDELRVLKPLNDSVLRQCLAL--LDGFERLCPPNGENRVVVYTTTLRG 89

Query: 215 VRKTFEACNAVRAATEGMGVVVNERDVSMHYGYREEL 325
           VRKTFE CNAVRAA EG+GV + ERD+SM  G++EEL
Sbjct: 90  VRKTFEDCNAVRAAIEGLGVSLCERDISMDRGFKEEL 126


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