BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029082
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32614.3| unnamed protein product [Vitis vinifera]              181   9e-44
ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containi...   181   9e-44
ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
ref|XP_002322855.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containi...   172   4e-41

>emb|CBI32614.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  181 bits (458), Expect = 9e-44
 Identities = 85/92 (92%), Positives = 90/92 (97%)
 Frame = -1

Query: 559 GLLDTLADVCVRSAFFKKALEIGACMEENGISPNKTKYTRIYVEMHSRMFTSKHASRARQ 380
           GLLDTLAD+CVR+AFF+KALEI ACMEENGI PNK+KYTRIYVEMHSRMFTSKHAS+ARQ
Sbjct: 610 GLLDTLADICVRAAFFRKALEIVACMEENGIPPNKSKYTRIYVEMHSRMFTSKHASKARQ 669

Query: 379 DRRSERKRAAEAFKFWLGLPNSYYGSEWRLEP 284
           DRRSERKRAAEAFKFWLGLPNSYYGSEWRLEP
Sbjct: 670 DRRSERKRAAEAFKFWLGLPNSYYGSEWRLEP 701


>ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Vitis vinifera]
          Length = 749

 Score =  181 bits (458), Expect = 9e-44
 Identities = 85/92 (92%), Positives = 90/92 (97%)
 Frame = -1

Query: 559 GLLDTLADVCVRSAFFKKALEIGACMEENGISPNKTKYTRIYVEMHSRMFTSKHASRARQ 380
           GLLDTLAD+CVR+AFF+KALEI ACMEENGI PNK+KYTRIYVEMHSRMFTSKHAS+ARQ
Sbjct: 647 GLLDTLADICVRAAFFRKALEIVACMEENGIPPNKSKYTRIYVEMHSRMFTSKHASKARQ 706

Query: 379 DRRSERKRAAEAFKFWLGLPNSYYGSEWRLEP 284
           DRRSERKRAAEAFKFWLGLPNSYYGSEWRLEP
Sbjct: 707 DRRSERKRAAEAFKFWLGLPNSYYGSEWRLEP 738


>ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Cucumis sativus]
           gi|449483612|ref|XP_004156638.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Cucumis sativus]
          Length = 736

 Score =  172 bits (437), Expect = 3e-41
 Identities = 81/94 (86%), Positives = 88/94 (93%)
 Frame = -1

Query: 559 GLLDTLADVCVRSAFFKKALEIGACMEENGISPNKTKYTRIYVEMHSRMFTSKHASRARQ 380
           GLLDTLAD+CVR+AFF+KALEI ACMEENGI PNKTKY+RIYVEMHSRMFTSKHAS+ARQ
Sbjct: 640 GLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKYSRIYVEMHSRMFTSKHASKARQ 699

Query: 379 DRRSERKRAAEAFKFWLGLPNSYYGSEWRLEPGN 278
           DRR E+KRAAEAFKFWLGLPNSYYGSEW  EP +
Sbjct: 700 DRRIEKKRAAEAFKFWLGLPNSYYGSEWGWEPSD 733


>ref|XP_002322855.1| predicted protein [Populus trichocarpa] gi|222867485|gb|EEF04616.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score =  172 bits (436), Expect = 3e-41
 Identities = 81/93 (87%), Positives = 88/93 (94%)
 Frame = -1

Query: 556 LLDTLADVCVRSAFFKKALEIGACMEENGISPNKTKYTRIYVEMHSRMFTSKHASRARQD 377
           LL TLAD+CVR+AFF+KALEI ACMEENGI PNKTKY +IYVEMHSRMFTSKHAS+ARQD
Sbjct: 656 LLATLADICVRAAFFQKALEIVACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARQD 715

Query: 376 RRSERKRAAEAFKFWLGLPNSYYGSEWRLEPGN 278
           RR ERKRAAEAFKFWLGLPNSYYGSEWRL+PG+
Sbjct: 716 RRRERKRAAEAFKFWLGLPNSYYGSEWRLDPGD 748


>ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Glycine max]
          Length = 716

 Score =  172 bits (435), Expect = 4e-41
 Identities = 83/92 (90%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
 Frame = -1

Query: 556 LLDTLADVCVRSAFFKKALEIGACMEENGISPNKTKYTRIYVEMHSRMFTSKHASRARQD 377
           LLDT+AD+CVR+AFF+KALEI ACMEENGI PNKTK+TRIYVEMHSRMFTSKHASRARQD
Sbjct: 614 LLDTIADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRARQD 673

Query: 376 RRSERKRAAEAFKFWLGLPNSYY-GSEWRLEP 284
           RR ERKRAAEAFKFWLGLPNSYY GSEWRLEP
Sbjct: 674 RRVERKRAAEAFKFWLGLPNSYYDGSEWRLEP 705