BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029078
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    61   8e-08
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    59   4e-07
dbj|BAD66709.1| orf177 [Beta vulgaris subsp. vulgaris]                 57   1e-06

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/105 (32%), Positives = 58/105 (55%)
 Frame = -1

Query: 320 RGLKNALKPWSKSHFSDLSKRVDDARVTLHSLQEHLQISPTNAFLIQPEREARTSFCDLL 141
           R LK  LK ++ +HFS++S RV DA+  +   Q+ L  +  N  L   ER+    +   +
Sbjct: 659 RKLKQELKLFNMAHFSNISDRVRDAKNKMDKAQQALHTAHENPILCMRERDVVHKYASTV 718

Query: 140 KMEHEDIRQRAGSKWMHLGDRCNSYFHNMLKERRCRSKIWTIFDE 6
           + E    +Q+A  +W+ LGD+  SYFH  +  R+ R+K+ ++  E
Sbjct: 719 RAEESFFKQKARIQWLSLGDQNTSYFHKSVNGRQNRNKLLSLTRE 763


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/103 (32%), Positives = 56/103 (54%)
 Frame = -1

Query: 314 LKNALKPWSKSHFSDLSKRVDDARVTLHSLQEHLQISPTNAFLIQPEREARTSFCDLLKM 135
           LK  LK ++ +HFS++S RV DA+  +   Q+ L  +  N  L   ER+    +   ++ 
Sbjct: 255 LKQELKLFNMAHFSNISDRVKDAKNEMDKAQQALHTAHENPILCMRERDVVHKYASTVRA 314

Query: 134 EHEDIRQRAGSKWMHLGDRCNSYFHNMLKERRCRSKIWTIFDE 6
           E    +Q+A  +W+ LGD+  SYFH  +  R  R+K+ ++  E
Sbjct: 315 EESFFKQKARIQWLSLGDQNTSYFHKSVNGRHNRNKLLSLTRE 357


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/108 (33%), Positives = 58/108 (53%)
 Frame = -1

Query: 347 TVGPSLLLFRGLKNALKPWSKSHFSDLSKRVDDARVTLHSLQEHLQISPTNAFLIQPERE 168
           T G + +    LK+ LK W++  F D+++R +     +  +QE L+I+ T+  L+  E E
Sbjct: 679 TEGETPVALAALKSKLKKWNREVFGDVNRRKESLMNEIKVVQELLEINQTDN-LLSKEEE 737

Query: 167 ARTSFCDLLKMEHEDIRQRAGSKWMHLGDRCNSYFHNMLKERRCRSKI 24
               F  +L+ E     Q++  KW+ LGDR   YFH M   RR R++I
Sbjct: 738 LIKEFDVVLEQEEVLWFQKSREKWVELGDRNTKYFHTMTVVRRRRNRI 785


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/103 (30%), Positives = 57/103 (55%)
 Frame = -1

Query: 314 LKNALKPWSKSHFSDLSKRVDDARVTLHSLQEHLQISPTNAFLIQPEREARTSFCDLLKM 135
           LK  ++ +++ H+S L KRV  A   L + Q +L  +P++ +L   E+EA  S+ +L   
Sbjct: 287 LKGTIRTFNREHYSGLEKRVVQAAQNLKTCQNNLLAAPSS-YLAGLEKEAHRSWAELALA 345

Query: 134 EHEDIRQRAGSKWMHLGDRCNSYFHNMLKERRCRSKIWTIFDE 6
           E   + Q++   W+  GD   ++FH M+  RR  ++I  + D+
Sbjct: 346 EERFLCQKSRVLWLKCGDSNTTFFHRMMTARRAINEIHYLLDQ 388


>dbj|BAD66709.1| orf177 [Beta vulgaris subsp. vulgaris]
          Length = 177

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/103 (32%), Positives = 55/103 (53%)
 Frame = -1

Query: 314 LKNALKPWSKSHFSDLSKRVDDARVTLHSLQEHLQISPTNAFLIQPEREARTSFCDLLKM 135
           LK  LK    S F+ ++ R++ AR  L  +Q  LQ +P N  L   E+  +    +   +
Sbjct: 34  LKVGLKQLHSSQFAGITSRIEKAREDLEVVQSSLQAAPLNPSLHSQEKTEQLRKWN--SI 91

Query: 134 EHEDIRQRAGSKWMHLGDRCNSYFHNMLKERRCRSKIWTIFDE 6
           E   +RQ++  +W+ LGD  N +F + +KER  R+ I  +FD+
Sbjct: 92  EESALRQQSRVQWLTLGDSNNHFFVSAIKERNFRNSIDVLFDD 134