BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029059
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510620.1| pentatricopeptide repeat-containing protein,...   221   5e-56
ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containi...   218   4e-55
ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   217   9e-55
ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   217   9e-55
ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containi...   217   9e-55

>ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551321|gb|EEF52807.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 708

 Score =  221 bits (563), Expect = 5e-56
 Identities = 104/141 (73%), Positives = 126/141 (89%)
 Frame = +3

Query: 9   PKVDHYACMVDLLSRAGQLHEAKAFIESVPIDHGLCLWRILLCACRNYRSYDIGAYAGEK 188
           PKV+HYACMVD+LSRAG+L+EAK FIES  IDHGLCLWRILL ACRNYR+Y++GAYAGEK
Sbjct: 549 PKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEK 608

Query: 189 LLALGSPESSAYVLLSSIYSSMGRWEDVQRVRSIMKRKRVSKEPGCSWIDIKNQLHVFVV 368
           L+ LGS ESSAYVLLS IY+++GR EDV+RVRS+MK + VSKEPGCSWI++K+ +HVFVV
Sbjct: 609 LMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVV 668

Query: 369 GDQLHPQIKEIRAEVKRLTKE 431
           GDQ+HP I EIR E+ RL+K+
Sbjct: 669 GDQMHPCIGEIRTEILRLSKQ 689


>ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera] gi|302141693|emb|CBI18896.3| unnamed
           protein product [Vitis vinifera]
          Length = 703

 Score =  218 bits (555), Expect = 4e-55
 Identities = 99/143 (69%), Positives = 126/143 (88%)
 Frame = +3

Query: 3   LDPKVDHYACMVDLLSRAGQLHEAKAFIESVPIDHGLCLWRILLCACRNYRSYDIGAYAG 182
           +DP+V+HYACMVD+LSRAG+L EA  F ES  IDHG+CLWRI+L ACRNYR+Y++GAYAG
Sbjct: 544 MDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAG 603

Query: 183 EKLLALGSPESSAYVLLSSIYSSMGRWEDVQRVRSIMKRKRVSKEPGCSWIDIKNQLHVF 362
           EKL+ LGS ESSAYVLLSSIYS++GRWEDV+RVR +MK + VSKEPGCSWI++K+ +HVF
Sbjct: 604 EKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVF 663

Query: 363 VVGDQLHPQIKEIRAEVKRLTKE 431
           VV DQ+HPQI +I  E+++L+K+
Sbjct: 664 VVKDQMHPQIGDIHVELRQLSKQ 686


>ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  217 bits (552), Expect = 9e-55
 Identities = 98/138 (71%), Positives = 125/138 (90%)
 Frame = +3

Query: 9   PKVDHYACMVDLLSRAGQLHEAKAFIESVPIDHGLCLWRILLCACRNYRSYDIGAYAGEK 188
           P+V+HYACMVD+LSRAG+LHE K FIES  IDHG+CLWRILL ACRNYR+Y++GAYAGEK
Sbjct: 551 PRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEK 610

Query: 189 LLALGSPESSAYVLLSSIYSSMGRWEDVQRVRSIMKRKRVSKEPGCSWIDIKNQLHVFVV 368
           L+ LGS ESSAY+LLSSIY+++GR +DV+RVR +MK + V+KEPGCSWI++K+Q+HVFVV
Sbjct: 611 LMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVV 670

Query: 369 GDQLHPQIKEIRAEVKRL 422
           GDQ+HPQI +I +E++RL
Sbjct: 671 GDQIHPQIVKICSELRRL 688


>ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score =  217 bits (552), Expect = 9e-55
 Identities = 98/138 (71%), Positives = 125/138 (90%)
 Frame = +3

Query: 9   PKVDHYACMVDLLSRAGQLHEAKAFIESVPIDHGLCLWRILLCACRNYRSYDIGAYAGEK 188
           P+V+HYACMVD+LSRAG+LHE K FIES  IDHG+CLWRILL ACRNYR+Y++GAYAGEK
Sbjct: 533 PRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEK 592

Query: 189 LLALGSPESSAYVLLSSIYSSMGRWEDVQRVRSIMKRKRVSKEPGCSWIDIKNQLHVFVV 368
           L+ LGS ESSAY+LLSSIY+++GR +DV+RVR +MK + V+KEPGCSWI++K+Q+HVFVV
Sbjct: 593 LMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVV 652

Query: 369 GDQLHPQIKEIRAEVKRL 422
           GDQ+HPQI +I +E++RL
Sbjct: 653 GDQIHPQIVKICSELRRL 670


>ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  217 bits (552), Expect = 9e-55
 Identities = 100/140 (71%), Positives = 121/140 (86%)
 Frame = +3

Query: 9   PKVDHYACMVDLLSRAGQLHEAKAFIESVPIDHGLCLWRILLCACRNYRSYDIGAYAGEK 188
           P V+HYACMVD+LSRAG+LHEAK FIES  +DHGLCLWRILL A +N+R YD+GAYAGEK
Sbjct: 556 PTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEK 615

Query: 189 LLALGSPESSAYVLLSSIYSSMGRWEDVQRVRSIMKRKRVSKEPGCSWIDIKNQLHVFVV 368
           L+ LGS ESSAYVLLSSIY+++G+WEDV+RVR +MK + V+KEPGCSWI++K+  HVFVV
Sbjct: 616 LMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHVFVV 675

Query: 369 GDQLHPQIKEIRAEVKRLTK 428
           GD +HPQI EIR  +K LTK
Sbjct: 676 GDNMHPQIDEIRLGLKLLTK 695