BLASTX nr result

ID: Coptis21_contig00029050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029050
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284237.1| PREDICTED: transcriptional activator Myb [Vi...   116   2e-24
ref|XP_004152727.1| PREDICTED: transcriptional activator Myb-lik...   115   4e-24
ref|XP_004169452.1| PREDICTED: transcriptional activator Myb-lik...   115   5e-24
emb|CCA29118.1| putative MYB transcription factor [Rosa hybrid c...   112   2e-23
emb|CCA29104.1| putative MYB transcription factor [Rosa rugosa]       112   2e-23

>ref|XP_002284237.1| PREDICTED: transcriptional activator Myb [Vitis vinifera]
          Length = 216

 Score =  116 bits (290), Expect = 2e-24
 Identities = 63/101 (62%), Positives = 70/101 (69%)
 Frame = -2

Query: 303 NQLSPSVEHRPFSQSEDDTILAAHLRYGNRWATIAKLLPGRTDNAVKNHWNSTLKKKHIE 124
           NQLSPSVEHRPFS +EDDTILAAH RYGNRWATIA+LLPGRTDNAVKNHWNSTLKK+  E
Sbjct: 79  NQLSPSVEHRPFSAAEDDTILAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKKRQRE 138

Query: 123 GKETSTSCGDVNNGYSEDMNKLGVGLSLSSTFEYDPNTTLT 1
             ++    G   +G   DM             E DP TTL+
Sbjct: 139 --QSQQMEGPSGSGSYPDM-------------EPDPITTLS 164


>ref|XP_004152727.1| PREDICTED: transcriptional activator Myb-like [Cucumis sativus]
          Length = 242

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/113 (53%), Positives = 78/113 (69%), Gaps = 12/113 (10%)
 Frame = -2

Query: 303 NQLSPSVEHRPFSQSEDDTILAAHLRYGNRWATIAKLLPGRTDNAVKNHWNSTLKKKHIE 124
           NQLSP+VEHRPFS +ED+TILAAH R+GNRWATIA+LLPGRTDNAVKNHWNSTLK++  E
Sbjct: 77  NQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARE 136

Query: 123 GKE--------TSTSCGDVNNGYSEDM----NKLGVGLSLSSTFEYDPNTTLT 1
            +          +  C  ++N  + ++    + L + +S+S   E DP T LT
Sbjct: 137 QQHHQQLVMDGITPECHGISNNNNNNVVNIASDLKLSVSVSVPLEDDPLTALT 189


>ref|XP_004169452.1| PREDICTED: transcriptional activator Myb-like [Cucumis sativus]
          Length = 242

 Score =  115 bits (287), Expect = 5e-24
 Identities = 63/113 (55%), Positives = 76/113 (67%), Gaps = 12/113 (10%)
 Frame = -2

Query: 303 NQLSPSVEHRPFSQSEDDTILAAHLRYGNRWATIAKLLPGRTDNAVKNHWNSTLKKKHIE 124
           NQLSP+VEHRPFS +ED+TILAAH R+GNRWATIA+LLPGRTDNAVKNHWNSTLK++  E
Sbjct: 77  NQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARE 136

Query: 123 GKE---------TSTSCGDVNNGYSEDMN---KLGVGLSLSSTFEYDPNTTLT 1
            +          T    G  NN  +  +N    L + +S+S   E DP T LT
Sbjct: 137 QQHHQQLVMDGITPECHGISNNNNNNAVNIASDLKLSVSVSVPLEDDPLTALT 189


>emb|CCA29118.1| putative MYB transcription factor [Rosa hybrid cultivar]
          Length = 256

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/57 (87%), Positives = 56/57 (98%)
 Frame = -2

Query: 303 NQLSPSVEHRPFSQSEDDTILAAHLRYGNRWATIAKLLPGRTDNAVKNHWNSTLKKK 133
           NQLSPSV+HRPFSQ+ED+TILAAH RYGNRWATIA+LLPGRTDNAVKNHWNSTLK++
Sbjct: 81  NQLSPSVQHRPFSQAEDETILAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 137


>emb|CCA29104.1| putative MYB transcription factor [Rosa rugosa]
          Length = 253

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/57 (87%), Positives = 56/57 (98%)
 Frame = -2

Query: 303 NQLSPSVEHRPFSQSEDDTILAAHLRYGNRWATIAKLLPGRTDNAVKNHWNSTLKKK 133
           NQLSPSV+HRPFSQ+ED+TILAAH RYGNRWATIA+LLPGRTDNAVKNHWNSTLK++
Sbjct: 81  NQLSPSVQHRPFSQAEDETILAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 137


Top