BLASTX nr result

ID: Coptis21_contig00029039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029039
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283969.2| PREDICTED: U-box domain-containing protein 4...   283   4e-74
emb|CBI26345.3| unnamed protein product [Vitis vinifera]              283   4e-74
emb|CAN77516.1| hypothetical protein VITISV_040938 [Vitis vinifera]   283   4e-74
ref|XP_002314659.1| predicted protein [Populus trichocarpa] gi|2...   266   3e-69
ref|XP_002527304.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   254   1e-65

>ref|XP_002283969.2| PREDICTED: U-box domain-containing protein 43-like [Vitis vinifera]
          Length = 1016

 Score =  283 bits (723), Expect = 4e-74
 Identities = 149/255 (58%), Positives = 184/255 (72%), Gaps = 3/255 (1%)
 Frame = +2

Query: 2    RQSIEEWKELNYCLKIRSAKKKLQSNVDSVVEEALGYMEMIFIENPITKDWISIEGLIDI 181
            RQSIEEW+E+NYCLKIRS+K+KL S VD  VE AL  M+ +  EN I KDWI+I GL  I
Sbjct: 320  RQSIEEWREINYCLKIRSSKEKLLSGVDLSVEAALIQMQDLMRENSINKDWITIGGLTAI 379

Query: 182  CLSILGRSPNKDIKRRILEVLKGAVDGHKINKENVIESGGIGHIVPCLELSSNASKAAVE 361
             +SILG S NKD+KR IL  LK  V+GH  NKE V+E  G+ HI+PCL   S+ SKAAVE
Sbjct: 380  IVSILGSSHNKDVKRNILITLKYVVEGHARNKEKVVEFKGLDHIIPCLGRDSSISKAAVE 439

Query: 362  LLFELLQDGSGWNLSASRIVSEKRQVVFFLVNLMS---MDSMEKAKTILMKLCDGDDENI 532
            LL+ELLQD SGWN+S  R +S+    + FLV L+     +S EKA+ ILMKLCD D+ENI
Sbjct: 440  LLYELLQDKSGWNVSVCRKLSQTCSAILFLVTLLKGPVKESAEKAEKILMKLCDEDEENI 499

Query: 533  IRAAEANWYKPLIDRLVQGPDLSRVSMAKGLVKMELSSPSLQRLGEEGAIPPLLRMLSGN 712
             RAA A+WYKPLIDR+++G + SR+S  + LV MEL   ++  LG+EG IPPLL M SGN
Sbjct: 500  SRAARADWYKPLIDRIIRGSETSRISKVRTLVNMELVDQNITLLGKEGVIPPLLEMASGN 559

Query: 713  FECKEGALPALVKLS 757
             E +E +L ALVKLS
Sbjct: 560  VESQEASLSALVKLS 574


>emb|CBI26345.3| unnamed protein product [Vitis vinifera]
          Length = 1013

 Score =  283 bits (723), Expect = 4e-74
 Identities = 149/255 (58%), Positives = 184/255 (72%), Gaps = 3/255 (1%)
 Frame = +2

Query: 2    RQSIEEWKELNYCLKIRSAKKKLQSNVDSVVEEALGYMEMIFIENPITKDWISIEGLIDI 181
            RQSIEEW+E+NYCLKIRS+K+KL S VD  VE AL  M+ +  EN I KDWI+I GL  I
Sbjct: 320  RQSIEEWREINYCLKIRSSKEKLLSGVDLSVEAALIQMQDLMRENSINKDWITIGGLTAI 379

Query: 182  CLSILGRSPNKDIKRRILEVLKGAVDGHKINKENVIESGGIGHIVPCLELSSNASKAAVE 361
             +SILG S NKD+KR IL  LK  V+GH  NKE V+E  G+ HI+PCL   S+ SKAAVE
Sbjct: 380  IVSILGSSHNKDVKRNILITLKYVVEGHARNKEKVVEFKGLDHIIPCLGRDSSISKAAVE 439

Query: 362  LLFELLQDGSGWNLSASRIVSEKRQVVFFLVNLMS---MDSMEKAKTILMKLCDGDDENI 532
            LL+ELLQD SGWN+S  R +S+    + FLV L+     +S EKA+ ILMKLCD D+ENI
Sbjct: 440  LLYELLQDKSGWNVSVCRKLSQTCSAILFLVTLLKGPVKESAEKAEKILMKLCDEDEENI 499

Query: 533  IRAAEANWYKPLIDRLVQGPDLSRVSMAKGLVKMELSSPSLQRLGEEGAIPPLLRMLSGN 712
             RAA A+WYKPLIDR+++G + SR+S  + LV MEL   ++  LG+EG IPPLL M SGN
Sbjct: 500  SRAARADWYKPLIDRIIRGSETSRISKVRTLVNMELVDQNITLLGKEGVIPPLLEMASGN 559

Query: 713  FECKEGALPALVKLS 757
             E +E +L ALVKLS
Sbjct: 560  VESQEASLSALVKLS 574


>emb|CAN77516.1| hypothetical protein VITISV_040938 [Vitis vinifera]
          Length = 1147

 Score =  283 bits (723), Expect = 4e-74
 Identities = 149/255 (58%), Positives = 184/255 (72%), Gaps = 3/255 (1%)
 Frame = +2

Query: 2    RQSIEEWKELNYCLKIRSAKKKLQSNVDSVVEEALGYMEMIFIENPITKDWISIEGLIDI 181
            RQSIEEW+E+NYCLKIRS+K+KL S VD  VE AL  M+ +  EN I KDWI+I GL  I
Sbjct: 320  RQSIEEWREINYCLKIRSSKEKLLSGVDLSVEAALIQMQDLIRENSINKDWITIGGLTAI 379

Query: 182  CLSILGRSPNKDIKRRILEVLKGAVDGHKINKENVIESGGIGHIVPCLELSSNASKAAVE 361
             +SILG S NKD+KR IL  LK  V+GH  NKE V+E  G+ HI+PCL   S+ SKAAVE
Sbjct: 380  IVSILGSSHNKDVKRNILITLKYVVEGHARNKEKVVEFKGLDHIIPCLGRDSSISKAAVE 439

Query: 362  LLFELLQDGSGWNLSASRIVSEKRQVVFFLVNLMS---MDSMEKAKTILMKLCDGDDENI 532
            LL+ELLQD SGWN+S  R +S+    + FLV L+     +S EKA+ ILMKLCD D+ENI
Sbjct: 440  LLYELLQDKSGWNVSVCRKLSQTCSAILFLVTLLKGPVKESAEKAEKILMKLCDEDEENI 499

Query: 533  IRAAEANWYKPLIDRLVQGPDLSRVSMAKGLVKMELSSPSLQRLGEEGAIPPLLRMLSGN 712
             RAA A+WYKPLIDR+++G + SR+S  + LV MEL   ++  LG+EG IPPLL M SGN
Sbjct: 500  SRAARADWYKPLIDRIIRGSETSRISKVRTLVNMELVDQNITLLGKEGVIPPLLEMASGN 559

Query: 713  FECKEGALPALVKLS 757
             E +E +L ALVKLS
Sbjct: 560  VESQEASLSALVKLS 574


>ref|XP_002314659.1| predicted protein [Populus trichocarpa] gi|222863699|gb|EEF00830.1|
            predicted protein [Populus trichocarpa]
          Length = 1032

 Score =  266 bits (681), Expect = 3e-69
 Identities = 145/256 (56%), Positives = 182/256 (71%), Gaps = 4/256 (1%)
 Frame = +2

Query: 2    RQSIEEWKELNYCLKIRSAKKKLQSNVDSVVEEALGYMEMIFIENPITKDWISIEGLIDI 181
            RQSIEEW+ELNYCL+IR++K KL ++ DS VEEAL  M+ +  EN I KDWISI GL DI
Sbjct: 336  RQSIEEWRELNYCLRIRASKAKLLASADSSVEEALNQMQDLMRENSINKDWISIGGLTDI 395

Query: 182  CLSILGRSPNKDIKRRILEVLKGAVDGHKINKENVIESGGIGHIVPCLELSSNASKAAVE 361
             + ILG S NKD KR+IL  LK  V GH  NKE +++ GG  H++PCL    + SKAAVE
Sbjct: 396  IICILGTSHNKDEKRKILVTLKDLVKGHVRNKEKLVDYGGWDHVIPCLGRDPSISKAAVE 455

Query: 362  LLFELLQDGSGWNLSASRIVSEKRQVVFFLVNLMS---MDSMEKAKTILMKLCDGDDENI 532
            LL+ELLQ+ SGWN+SA R +S++   + FLV L+     +S   A+ IL KL + D+ENI
Sbjct: 456  LLYELLQERSGWNVSACRKLSQQGSAILFLVTLLKGQVRESAVYAEKILNKLVEIDEENI 515

Query: 533  IRAAEANWYKPLIDRLVQGPDLSRVSMAKGLVKMELSSPSLQRLGEEGAIPPLLRML-SG 709
              AA++ WYKPLIDR+VQG D SR+SM + LV MEL    L+ LGEEG +P LL+ML SG
Sbjct: 516  SWAAKSGWYKPLIDRIVQGTDSSRISMVRALVNMELFDSDLKLLGEEGILPSLLQMLSSG 575

Query: 710  NFECKEGALPALVKLS 757
            N E KE +L ALVKLS
Sbjct: 576  NLESKELSLSALVKLS 591


>ref|XP_002527304.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
            gi|223533304|gb|EEF35056.1| E3 ubiquitin ligase PUB14,
            putative [Ricinus communis]
          Length = 1017

 Score =  254 bits (650), Expect = 1e-65
 Identities = 139/256 (54%), Positives = 179/256 (69%), Gaps = 4/256 (1%)
 Frame = +2

Query: 2    RQSIEEWKELNYCLKIRSAKKKLQSNVDSVVEEALGYMEMIFIENPITKDWISIEGLIDI 181
            RQSIEEW+ELNYCL+IR+ + KL S+ DS VE+AL +M+ +  EN + KDWISI GL DI
Sbjct: 320  RQSIEEWRELNYCLRIRTCRAKLLSDADSSVEDALSHMQDLMRENSVNKDWISIGGLTDI 379

Query: 182  CLSILGRSPNKDIKRRILEVLKGAVDGHKINKENVIESGGIGHIVPCLELSSNASKAAVE 361
             +SILG S N D+K +IL  LK  V+GH  NKE V+   G  +I+PCL   S  SK A+E
Sbjct: 380  IISILGSSHNNDVKGKILITLKKIVEGHARNKERVVNYEGWDNIIPCLVPDSVVSKVAME 439

Query: 362  LLFELLQDGSGWNLSASRIVSEKRQVVFFLVNLMS---MDSMEKAKTILMKLCDGDDENI 532
            LLFELLQD SGWN+S  R +S++   + FL+ L++    +S   A  IL KL + D+ENI
Sbjct: 440  LLFELLQDRSGWNVSVCRKLSQQCGAIPFLITLLNGHVNESAVCAGKILNKLFEIDEENI 499

Query: 533  IRAAEANWYKPLIDRLVQGPDLSRVSMAKGLVKMELSSPSLQRLGEEGAIPPLLRML-SG 709
             RAAE+ WYKPL++R+ QGP+ SR+SM + +V MEL   +L+ LGEEG IPPLL M  S 
Sbjct: 500  ARAAESGWYKPLVERIEQGPEASRISMVRAIVNMELVDSNLKLLGEEGIIPPLLEMARSC 559

Query: 710  NFECKEGALPALVKLS 757
            N E KE +L ALVKLS
Sbjct: 560  NTESKELSLSALVKLS 575


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