BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029008
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40923.3| unnamed protein product [Vitis vinifera]              204   1e-50
emb|CAN83063.1| hypothetical protein VITISV_010308 [Vitis vinifera]   204   1e-50
ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...   172   6e-41
ref|XP_002326677.1| predicted protein [Populus trichocarpa] gi|2...   171   1e-40
ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family prote...   154   2e-35

>emb|CBI40923.3| unnamed protein product [Vitis vinifera]
          Length = 6988

 Score =  204 bits (520), Expect = 1e-50
 Identities = 109/231 (47%), Positives = 146/231 (63%), Gaps = 2/231 (0%)
 Frame = +2

Query: 2   SFTNALCYLLNKSGTQPSDLQSFIWRAFIPVMKIVNANEHELLGPIAEQISDVVTKSNTW 181
           SF   +C+LL KSG      QSF W+ FIP+MKIV+A + E+L    E   DVV K+N+W
Sbjct: 70  SFVCGVCHLLEKSGVNSDAFQSFTWKCFIPLMKIVHACDREMLNQTTESFVDVVIKTNSW 129

Query: 182 EVIEASLVPFALRSVGLCIGMHQNEESAIYQWSGHSVIGGEGILLNGLDEDKEPMSPLYD 361
            V+E +LVPF +RSVGL +GM QNEESAIYQW+G SV        N  D  +E M P   
Sbjct: 130 GVLEETLVPFLIRSVGLSMGMLQNEESAIYQWTGSSVSQVSIQQRNYSDMIEESMFP--- 186

Query: 362 TLPLAISCHILTSLLVASLRHCQALQSPLEQTVLVG--CSAENFYRNLLWDVCGMAIRML 535
            L L ISCHILTS+L A+L+     ++P    +L    C AENF  +LLWD+C +++++L
Sbjct: 187 -LSLPISCHILTSILDAALQ--SHPEAPTTNLILANECCYAENFAGHLLWDLCNISVQLL 243

Query: 536 LQCPDHRSCTIHLLLPFVLRTFSCHTSFQVSVHRQKHVLSRDSFSRNIWDC 688
            Q  +HRSCTI  LLP + + F  H +F++S H + +VLSR  F + IW C
Sbjct: 244 SQSWEHRSCTISFLLPLIFKAFVSHKTFEISAHGKTYVLSRTCFLKEIWSC 294


>emb|CAN83063.1| hypothetical protein VITISV_010308 [Vitis vinifera]
          Length = 988

 Score =  204 bits (520), Expect = 1e-50
 Identities = 109/231 (47%), Positives = 146/231 (63%), Gaps = 2/231 (0%)
 Frame = +2

Query: 2   SFTNALCYLLNKSGTQPSDLQSFIWRAFIPVMKIVNANEHELLGPIAEQISDVVTKSNTW 181
           SF   +C+LL KSG      QSF W+ FIP+MKIV+A + E+L    E   DVV K+N+W
Sbjct: 70  SFVCGVCHLLEKSGVNSDAFQSFTWKCFIPLMKIVHACDREMLNQTTESFVDVVIKTNSW 129

Query: 182 EVIEASLVPFALRSVGLCIGMHQNEESAIYQWSGHSVIGGEGILLNGLDEDKEPMSPLYD 361
            V+E +LVPF +RSVGL +GM QNEESAIYQW+G SV        N  D  +E M P   
Sbjct: 130 GVLEETLVPFLIRSVGLSMGMLQNEESAIYQWTGSSVSQVSIQQQNYSDMIEESMFP--- 186

Query: 362 TLPLAISCHILTSLLVASLRHCQALQSPLEQTVLVG--CSAENFYRNLLWDVCGMAIRML 535
            L L ISCHILTS+L A+L+     ++P    +L    C AENF  +LLWD+C +++++L
Sbjct: 187 -LSLPISCHILTSILDAALQ--SHPEAPTTNLILANECCYAENFAGHLLWDLCNISVQLL 243

Query: 536 LQCPDHRSCTIHLLLPFVLRTFSCHTSFQVSVHRQKHVLSRDSFSRNIWDC 688
            Q  +HRSCTI  LLP + + F  H +F++S H + +VLSR  F + IW C
Sbjct: 244 SQSWEHRSCTISFLLPLIFKAFVSHKTFEISAHGKTYVLSRTCFLKEIWSC 294


>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
           gi|223536320|gb|EEF37970.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 1744

 Score =  172 bits (436), Expect = 6e-41
 Identities = 96/199 (48%), Positives = 126/199 (63%), Gaps = 5/199 (2%)
 Frame = +2

Query: 2   SFTNALCYLLNKSGTQPSDLQSFIWRAFIPVMKIVNANEHELLGPIAEQISDVVTKSNTW 181
           S   ALC+LL K G  P  +QS IW+ FIP+MK+ +A E E+L  IAE   DVV  +N+W
Sbjct: 65  SMVGALCHLLKKPGADPDSMQSLIWKCFIPLMKMAHALEREMLNQIAESFFDVVNVTNSW 124

Query: 182 EVIEASLVPFALRSVGLCIGMHQNEESAIYQWSGHSVIGGEGILLNGLDE----DKEPMS 349
           +V+EA+LVPF LRS GL + M QNEES I++W+ HSV      LL+GL +    DKE M 
Sbjct: 125 DVLEATLVPFFLRSAGLAMDMLQNEESDIFEWAQHSV------LLSGLIDDSNLDKEFML 178

Query: 350 PLYDTLPLAISCHILTSLLVASLRHCQALQSPLEQTVLVGCS-AENFYRNLLWDVCGMAI 526
            L  + PL ISCH+L  +L ++L+ C A  S  E  V  G S A+  +  LLWD+C M+ 
Sbjct: 179 SLSGSFPLPISCHVLAIILDSTLQSCNA-ASRTESMVENGSSYAQKLFYKLLWDLCNMSE 237

Query: 527 RMLLQCPDHRSCTIHLLLP 583
           R+LLQ  +HRSC    LLP
Sbjct: 238 RLLLQSLEHRSCATGFLLP 256


>ref|XP_002326677.1| predicted protein [Populus trichocarpa] gi|222833999|gb|EEE72476.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  171 bits (433), Expect = 1e-40
 Identities = 89/194 (45%), Positives = 120/194 (61%)
 Frame = +2

Query: 101 IVNANEHELLGPIAEQISDVVTKSNTWEVIEASLVPFALRSVGLCIGMHQNEESAIYQWS 280
           +V+A E E+L  IAE    VV+ +++W V+EA+LVPF LRSVGL IGM QNEES  ++W 
Sbjct: 1   MVHAFEREMLNEIAESFFCVVSSTHSWGVLEANLVPFFLRSVGLSIGMIQNEESDAFEWD 60

Query: 281 GHSVIGGEGILLNGLDEDKEPMSPLYDTLPLAISCHILTSLLVASLRHCQALQSPLEQTV 460
             S+  G   L N  D D+EPM  L  + PL ISCHILT +L A+L+  QA+ S      
Sbjct: 61  HFSIYHGLSDLENDFDLDQEPMLSLSGSFPLPISCHILTLILDAALQSFQAVSSTKSMLA 120

Query: 461 LVGCSAENFYRNLLWDVCGMAIRMLLQCPDHRSCTIHLLLPFVLRTFSCHTSFQVSVHRQ 640
              C  E  + NLLWD+C M+ R+L Q  +HRSCTI  LLP + +      S +++VH +
Sbjct: 121 NGFCDVEKLFSNLLWDLCNMSERLLSQSLEHRSCTIGFLLPIIFKALGSQCSLEITVHGK 180

Query: 641 KHVLSRDSFSRNIW 682
             +LSR+ F R IW
Sbjct: 181 MFILSRNVFFRKIW 194


>ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
           thaliana] gi|332658520|gb|AEE83920.1| tRNA/rRNA
           methyltransferase (SpoU) family protein [Arabidopsis
           thaliana]
          Length = 1850

 Score =  154 bits (388), Expect = 2e-35
 Identities = 84/233 (36%), Positives = 127/233 (54%), Gaps = 4/233 (1%)
 Frame = +2

Query: 2   SFTNALCYLLNKSGTQPSD----LQSFIWRAFIPVMKIVNANEHELLGPIAEQISDVVTK 169
           S    LC+LL   G   +D    LQ F+WR FIP+MK+V A + ++L  I E   DVV +
Sbjct: 71  SLVAGLCHLLKNFGFVAADNHNALQLFVWRVFIPLMKMVRAYDLDMLNKIVESFFDVVIE 130

Query: 170 SNTWEVIEASLVPFALRSVGLCIGMHQNEESAIYQWSGHSVIGGEGILLNGLDEDKEPMS 349
           +N  +++  SLVPF LRSVG  +GM Q+EES   +W    +       LN +D D+  ++
Sbjct: 131 TNVLDMLGVSLVPFLLRSVGFSMGMRQHEESDFIKWGDLCLRDS----LNTIDMDENYIA 186

Query: 350 PLYDTLPLAISCHILTSLLVASLRHCQALQSPLEQTVLVGCSAENFYRNLLWDVCGMAIR 529
            L  + P+ +SCH+L  +L A+ +  QA               E+F   +LWD+C    R
Sbjct: 187 QLSGSFPIPLSCHLLNLILNAAFQSHQAAP-----------KVESFAAGMLWDLCNTTER 235

Query: 530 MLLQCPDHRSCTIHLLLPFVLRTFSCHTSFQVSVHRQKHVLSRDSFSRNIWDC 688
           +L Q  +HRSC +  LLP + + FS  +S ++S      +LSR+ F + IW+C
Sbjct: 236 LLSQSVEHRSCAVSFLLPAIFKAFSSQSSLKISHQGNLFILSRNGFIKRIWEC 288