BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029005
         (1767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282238.1| PREDICTED: WD repeat-containing protein 11-l...   655   0.0  
ref|XP_004150033.1| PREDICTED: WD repeat-containing protein 11-l...   605   e-170
ref|XP_003609372.1| WD repeat-containing protein [Medicago trunc...   597   e-168
ref|XP_002527186.1| nucleotide binding protein, putative [Ricinu...   583   e-164
ref|NP_001190004.1| transducin/WD40 domain-containing protein [A...   578   e-162

>ref|XP_002282238.1| PREDICTED: WD repeat-containing protein 11-like [Vitis vinifera]
          Length = 1317

 Score =  655 bits (1691), Expect = 0.0
 Identities = 341/585 (58%), Positives = 417/585 (71%), Gaps = 17/585 (2%)
 Frame = +3

Query: 63   MSRLAHETWDCMLPGAPSRNNAGSSDCTTSGLLAYGAGSSVSIIDTRSMQLLXXXXXXXX 242
            M+R  HE+WDCMLPG PSRNN GS+DC  SGLLA+ + SSVS++D+RSMQL+        
Sbjct: 1    MARPPHESWDCMLPGPPSRNNGGSADCHPSGLLAFPSSSSVSVVDSRSMQLVSVLPMPPP 60

Query: 243  XXXXX-------------LAPFVTSVRWTPQPLRRDILTHEPSNSHLILAVGDRQGRISL 383
                              L+PFVTSVRW P PL  D+  ++    HL+LA GDRQGRI+L
Sbjct: 61   TGTSSSNTNSAASSSSSSLSPFVTSVRWAPFPLPHDLTNYQ----HLLLAAGDRQGRIAL 116

Query: 384  YDVRLKLLILKMEPTEPSKLLGIQDLCWIQSKPDSWILASISGPSLVSLYNTSTGRCIWK 563
            +D RL+ ++L  E ++P+   GIQDLCW+Q + D W+LAS+SGPSL+S++N STGRCIWK
Sbjct: 117  FDFRLRSVLLWFE-SDPASKPGIQDLCWVQGRSD-WVLASLSGPSLLSIWNASTGRCIWK 174

Query: 564  YDASPEFFSCIRRDPFDARHFCVLGLKGFLLSAKLLGENEDDVVIKERQIPINDSNELQR 743
            YD SPEFFSCIRRDPFD+RH C +GLKGFLLS K+LG+ EDDVVIKE  IP NDS+ELQ+
Sbjct: 175  YDVSPEFFSCIRRDPFDSRHLCAIGLKGFLLSIKVLGDTEDDVVIKEFHIP-NDSSELQK 233

Query: 744  PET----VNFSAPALGAFPNYLVKLCFSPQWKHILFLSFPKELVVFDLQYETSLSSFGLP 911
             E        S+PAL  FP Y+V+  FSP WKHILF++FP+EL+VFDLQYETSL +  LP
Sbjct: 234  LERDASGTAASSPALAVFPLYIVRFSFSPLWKHILFVAFPRELIVFDLQYETSLFAAALP 293

Query: 912  RGCGKFIDVVPDPDNELIYCAHADGKLSIWRRKEGEQVYIMCTMEELMPSIGTPVPSPMI 1091
            RGCGKF+DV+PDP+NEL+YCAH DG+LS WRRKEGEQV++MCTMEELMPSIGTPVPSP I
Sbjct: 294  RGCGKFLDVLPDPNNELLYCAHLDGRLSTWRRKEGEQVHVMCTMEELMPSIGTPVPSPSI 353

Query: 1092 LAVVLCQSESTLRSVGNFNSDMSPMSVFSKDHDSHTEFPSKSHNVSKSYLISLSDDGNVW 1271
            LAVV+C+S+STL+ VGN  S  S  S F  D D+  +F  +S  VSK++LIS+SDDG +W
Sbjct: 354  LAVVICKSDSTLQCVGNLYSSGSCSSSFDMDFDNPFDFCDESFYVSKTHLISISDDGKIW 413

Query: 1272 SWLLTAEGARDPQKVFTSVNRDAAVTEATDPDTHTNTTDSSIRGSTSGAVKDSEPMNDIS 1451
            +WLLT+EG  D  K  T+V + A V E     T+TN  D      T+  VK  +      
Sbjct: 414  NWLLTSEGTEDTHKEATNVGKGADVGEGPVSGTNTNNID-----GTADLVKQPD------ 462

Query: 1452 RRLINTTSSNVNFTFKINLVGQLHLLSSTVTVIAVPSPSLTATLARGGNNPAVAVPLVAL 1631
                           +I+LVGQL LLSST T++AVPSPSLTATLARGGN+PAVAVPLVAL
Sbjct: 463  --------------LQISLVGQLQLLSSTATMLAVPSPSLTATLARGGNSPAVAVPLVAL 508

Query: 1632 GTQGGTIDVIDXXXXXXXXXXXXHNTLIRGLRWLGNSRLVSFSYS 1766
            GTQ GTIDVID            HN+ +RGLRWLGNSRLVSFSY+
Sbjct: 509  GTQSGTIDVIDVSANAVAASFSVHNSTVRGLRWLGNSRLVSFSYA 553


>ref|XP_004150033.1| PREDICTED: WD repeat-containing protein 11-like [Cucumis sativus]
          Length = 1327

 Score =  605 bits (1559), Expect = e-170
 Identities = 320/570 (56%), Positives = 399/570 (70%), Gaps = 7/570 (1%)
 Frame = +3

Query: 78   HETWDCMLPGAPSRNNAGSSDCTTSGLLAYGAGSSVSIIDTRSMQLLXXXXXXXXXXXXX 257
            H++WDCMLPG PSRNN GS+D + SGLLA+ +GSSVSI+D+RSMQL+             
Sbjct: 21   HDSWDCMLPGPPSRNNFGSADISPSGLLAFPSGSSVSIVDSRSMQLITAIPMPPPSTTAT 80

Query: 258  -LAPFVTSVRWTPQPLRRDILTHEPSNSHLILAVGDRQGRISLYDVRLKLLILKMEPTEP 434
             L+PFVTSVRWTP PL RD+L+ EPS SHL LA  DRQGRI+L D RLK   +  + ++ 
Sbjct: 81   SLSPFVTSVRWTPLPLHRDLLSTEPSTSHLHLAAADRQGRIALLDFRLKSPTIWFDTSDY 140

Query: 435  SKLLGIQDLCWIQSKPDSWILASISGPSLVSLYNTSTGRCIWKYDASPEFFSCIRRDPFD 614
                G+QDLCW++S PDS++LA+I G S +SLY+ +T RC+WKYDASPE+ SCIR DPFD
Sbjct: 141  K--YGVQDLCWVRSGPDSYLLAAIHGASALSLYSVTTARCVWKYDASPEYLSCIRYDPFD 198

Query: 615  ARHFCVLGLKGFLLSAKLLGENEDDVVIKERQIPINDSN--ELQRPETVNFSAPALGAFP 788
            +RHFCV+GLKGFLLS ++LGE E DVVIKE +I  + +   +L+R      S+PA   FP
Sbjct: 199  SRHFCVIGLKGFLLSVQVLGEKESDVVIKELRIGTDCTELLKLERDAASGSSSPASAMFP 258

Query: 789  NYLVKLCFSPQWKHILFLSFPKELVVFDLQYETSLSSFGLPRGCGKFIDVVPDPDNELIY 968
             Y  K  FSP+W+HILF++FP+ELVVFDLQYET+L S  LPRGCGKF+DV+PDPD+EL+Y
Sbjct: 259  LYNAKFAFSPKWRHILFVTFPRELVVFDLQYETALFSTSLPRGCGKFLDVLPDPDSELLY 318

Query: 969  CAHADGKLSIWRRKEGEQVYIMCTMEELMPSIGTPVPSPMILAVVLCQSESTLRSVGNFN 1148
            C H DG+LS WRRKEGEQV++M  MEEL+PSIGT VPSP +LAVV+CQS+S L++V    
Sbjct: 319  CPHLDGRLSTWRRKEGEQVHVMSAMEELLPSIGTSVPSPSVLAVVICQSDSILQNVAKLC 378

Query: 1149 SDMSPMSVFSKDHDSHTEFPSKSHNVSKSYLISLSDDGNVWSWLLTAEGARDPQKVFTSV 1328
            SD+ P +    D  S  +   + H +S ++LIS+SDDG VW+WL+TAE   D Q     V
Sbjct: 379  SDV-PEAEAEADIVSPFDSYDECHPISSTHLISISDDGKVWNWLVTAE---DTQTDDACV 434

Query: 1329 NRDAAVTEATDPDTHTNTTDSSIRGSTSGAVKDSEPMNDISRR----LINTTSSNVNFTF 1496
            +    V      D++T+   SS     S A K  +  N    R    L N     V    
Sbjct: 435  SMSTDVGGVPTSDSNTDQIVSSTNSLASEAGKQLDHANTSCGRPPSGLRNLCLITVKSLM 494

Query: 1497 KINLVGQLHLLSSTVTVIAVPSPSLTATLARGGNNPAVAVPLVALGTQGGTIDVIDXXXX 1676
            +I+LVGQL LLSS VT++AVPSPSL ATLARGGN PAVAVPLVALGTQ GTIDVID    
Sbjct: 495  QISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNYPAVAVPLVALGTQSGTIDVIDISAN 554

Query: 1677 XXXXXXXXHNTLIRGLRWLGNSRLVSFSYS 1766
                    HN+++RGLRWLGNSRLVSFSYS
Sbjct: 555  SVSSSFSVHNSVVRGLRWLGNSRLVSFSYS 584


>ref|XP_003609372.1| WD repeat-containing protein [Medicago truncatula]
            gi|355510427|gb|AES91569.1| WD repeat-containing protein
            [Medicago truncatula]
          Length = 1581

 Score =  597 bits (1539), Expect = e-168
 Identities = 328/611 (53%), Positives = 404/611 (66%), Gaps = 31/611 (5%)
 Frame = +3

Query: 24   TPATAETEKKEGKMSRLAHETWDCMLPGAPSRNNAGSSDCTTSGLLAYGAGSSVSIIDTR 203
            +P ++   +     S    E+W+ MLPG  SRNN GSSD   +GLLA+ +GSS+SI+DTR
Sbjct: 11   SPRSSSQPQSPFSSSSSPQESWESMLPGPSSRNNFGSSDLNPNGLLAFPSGSSISIVDTR 70

Query: 204  SMQLLXXXXXXXXXXXXXLAPFVTSVRWTPQPLRRDILTHEPSNSHLILAVGDRQGRISL 383
            SMQLL              APFVTSVRW P PL R +L+ EPS+SHL+LA GDRQGRI+L
Sbjct: 71   SMQLLSAFPIPPPPSSA--APFVTSVRWIPLPLNRHLLSSEPSSSHLLLAAGDRQGRIAL 128

Query: 384  YDVRLKLLILKMEPTEPSKLLGIQDLCWIQSKPDSWILASISGPSLVSLYNTSTGRCIWK 563
             D RLK  IL  E       LGIQDLCWIQ++PD  ILA+I+GPS +SL+N STGRC+WK
Sbjct: 129  LDFRLKSAILWFETDSK---LGIQDLCWIQARPDLLILAAITGPSTLSLFNGSTGRCVWK 185

Query: 564  YDASPEFFSCIRRDPFDARHFCVLGLKGFLLSAKLLGENEDDVVIKERQIPINDSNELQR 743
            YDASPE+FSCIRRD FD+R  C +GLKGFLLS   +G++E+ VVIKE QI   DS EL +
Sbjct: 186  YDASPEYFSCIRRDAFDSRRICAIGLKGFLLSLLHVGDSEESVVIKELQIR-TDSTELAK 244

Query: 744  PET--VNFSAPALGAFPNYLVKLCFSPQWKHILFLSFPKELVVFDLQYETSLSSFGLPRG 917
             E      +APA  AFP ++ +  FS  W+HILF++FP+ELVVFDLQYE  + +  LPRG
Sbjct: 245  LERDFTGAAAPASAAFPLHVARFAFSQLWRHILFVTFPRELVVFDLQYECVIFASSLPRG 304

Query: 918  CGKFIDVVPDPDNELIYCAHADGKLSIWRRKEGEQVYIMCTMEELMPSIGTPVPSPMILA 1097
            CGKF+DV+PDP NE IYCAH DGKLS W+RK GEQV+ M +MEELMPS+GT VPSP IL+
Sbjct: 305  CGKFLDVLPDPSNEWIYCAHVDGKLSTWKRKPGEQVHTMYSMEELMPSVGTSVPSPSILS 364

Query: 1098 VVLCQSESTLRSVGNFNSDMSPMSVFSKDHDSHTEFPSKSHNVSKSYLISLSDDGNVWSW 1277
            VVLCQS+STL+++G   SD+       +D D+  +F  +S  +SK +LIS+SDDG +W W
Sbjct: 365  VVLCQSDSTLQNIGKNYSDIPSSPYLHEDFDNPFDFCDESQIISKIHLISISDDGKIWDW 424

Query: 1278 LLTAEGARDPQ---KVFTSVNRDAAVTEATDPDTHTNTTDSSIRGSTSGAVKDSEPMNDI 1448
            LLTAE   D Q   K    VN D  V  A D   ++NT  S   G      +  E  ND 
Sbjct: 425  LLTAEANADTQKDDKKLGLVNDDCTV--ALD-GANSNTMVSIAGGRELNVGRPQEHPNDN 481

Query: 1449 SRRLINTTSSNVNFTFK--------------------------INLVGQLHLLSSTVTVI 1550
              RL ++TS++   + K                          INLVGQL LLSSTVT++
Sbjct: 482  RSRLPSSTSNHEEISMKYIYSTTYLDPMWVRQVIAGISLNLPSINLVGQLQLLSSTVTML 541

Query: 1551 AVPSPSLTATLARGGNNPAVAVPLVALGTQGGTIDVIDXXXXXXXXXXXXHNTLIRGLRW 1730
            AVP+PSLTATLARGGN PA AVPLVALGTQ GTI+V+D            HN ++RGLRW
Sbjct: 542  AVPTPSLTATLARGGNYPAAAVPLVALGTQNGTIEVVDVSANAVTSSLCVHNGIVRGLRW 601

Query: 1731 LGNSRLVSFSY 1763
            LGNSRLVSFSY
Sbjct: 602  LGNSRLVSFSY 612


>ref|XP_002527186.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223533451|gb|EEF35199.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 1357

 Score =  583 bits (1503), Expect = e-164
 Identities = 313/588 (53%), Positives = 403/588 (68%), Gaps = 27/588 (4%)
 Frame = +3

Query: 84   TWDCMLPGAPSRNNAGSSDCTTSGLLAYGAGSSVSIIDTRSMQLLXXXXXXXXXXXXX-- 257
            T +CMLPG PSRNN  S D ++SGLLA+ +GSS+SI+D+RS+QL+               
Sbjct: 12   TSECMLPGPPSRNNFNSIDLSSSGLLAFPSGSSISIVDSRSLQLISTIPLPPPPNSSSSS 71

Query: 258  ------LAPFVTSVRWTPQPLRRDILTHEPSNSHLILAVGDRQGRISLYDVRLKLLILKM 419
                  L+PF+TSVRWTP PL RD+L+ E S+SHL+LA  DR GRI+L D RLK ++L +
Sbjct: 72   SSSSSSLSPFITSVRWTPLPLPRDLLSTESSSSHLLLAAADRHGRIALLDFRLKSVLLWL 131

Query: 420  EPTEPSKLLGIQDLCWIQSKPDSWILASISGPSLVSLYNTSTG-----RCIWKYDASPEF 584
            +  +PS   G+QDLCWI S+PDS+ILA+ISG S +SLY T+T      +C +KYDASPEF
Sbjct: 132  DH-DPSPKCGVQDLCWILSRPDSYILAAISGTSTLSLYTTATTTTTIPKCFFKYDASPEF 190

Query: 585  FSCIRRDPFDARHFCVLGLKGFLLSAKLLGENEDDVVIKERQIPINDSNELQRPETVNFS 764
             SCIRRDPFD+RHFCV+GLKG LLS K+LGE E+D+VIKE  I   D +EL R E    S
Sbjct: 191  LSCIRRDPFDSRHFCVIGLKGLLLSIKVLGETENDIVIKELSIK-TDYSELARLERDTTS 249

Query: 765  --------APALGAFPNYLVKLCFSPQWKHILFLSFPKELVVFDLQYETSLSSFGLPRGC 920
                    APA   FP Y VK  FSPQW+HI+F++FP+EL+VFDLQYET+L S  LPRGC
Sbjct: 250  SNSGGSSPAPASAVFPLYSVKFSFSPQWRHIVFVTFPRELIVFDLQYETALFSTALPRGC 309

Query: 921  GKFIDVVPDPDNELIYCAHADGKLSIWRRKEGEQVYIMCTMEELMPSIGTPVPSPMILAV 1100
             KF+DV+PDP+NEL+YC H DGKLSIWRRK+GEQ+++MC +EELMPSIGT VPSP +LAV
Sbjct: 310  SKFLDVLPDPNNELLYCVHLDGKLSIWRRKDGEQLHVMCAIEELMPSIGTSVPSPSVLAV 369

Query: 1101 VLCQSESTLRSVGNFNSDMSPMSVFSKDHDSHTEFPSKSHNVSKSYLISLSDDGNVWSWL 1280
             + QSES L++V    SD+    +  KD D+  +F   +  +SK++LIS+SDDG +W+WL
Sbjct: 370  TISQSESILQNVAKLCSDIPNTPLSEKDFDNPFDFFDDTLLLSKTHLISISDDGKIWNWL 429

Query: 1281 LTAEGARDPQKVFTSVNRDAAVTEATDPDTHTN---TTDSSIRGSTSGAVKDSEPMNDIS 1451
             T EG  D +K    ++  + V E      + +   + D    G  +G  +D+   N  S
Sbjct: 430  FTVEGTGDFKKDVKELDVASDVNEVPRLGANADGIASADGLAPGPEAGKQQDNASGNK-S 488

Query: 1452 RRLINTTSSNVNFTFK---INLVGQLHLLSSTVTVIAVPSPSLTATLARGGNNPAVAVPL 1622
            R  +    + +++  +   I+LVGQL LLSSTVT++AVPSPSLTATLARGGN PA AV L
Sbjct: 489  RPPLVLNQACISYKVRLVQISLVGQLQLLSSTVTMLAVPSPSLTATLARGGNYPAAAVSL 548

Query: 1623 VALGTQGGTIDVIDXXXXXXXXXXXXHNTLIRGLRWLGNSRLVSFSYS 1766
            VALGTQ GT+D++D            HN  +RGLRWLGNSRLVSFSYS
Sbjct: 549  VALGTQSGTVDIVDVSANAVAASFSVHNGTVRGLRWLGNSRLVSFSYS 596


>ref|NP_001190004.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
            gi|332644194|gb|AEE77715.1| transducin/WD40
            domain-containing protein [Arabidopsis thaliana]
          Length = 1376

 Score =  578 bits (1489), Expect = e-162
 Identities = 309/583 (53%), Positives = 396/583 (67%), Gaps = 21/583 (3%)
 Frame = +3

Query: 81   ETWDCMLPGAPSRNNAGSSDCTTSGLLAYGAGSSVSIIDTRSMQLLXXXXXXXXXXXXXL 260
            +TWD  LPG PSRNN GS+D + SGL A+ +GSSVS++D+RS+QL+             L
Sbjct: 10   DTWDSTLPGPPSRNNFGSADLSPSGLFAFASGSSVSVVDSRSLQLVSTIPLPPPPGA--L 67

Query: 261  APFVTSVRWTPQPLRRDILTHEPSNSHLILAVGDRQGRISLYDVRLKLLILKMEPTEPSK 440
            +PFVTSVRW P PL RD+L+ EPS SHL+LAV DR GR++L D  L+ +++ + P+   K
Sbjct: 68   SPFVTSVRWIPLPLPRDLLSTEPSASHLLLAVADRHGRVALVDFHLRSVVVWLNPSSDPK 127

Query: 441  LLGIQDLCWIQSKPDSWILASISGPSLVSLYNTSTGRCIWKYDASPEFFSCIRRDPFDAR 620
            L GIQDLCW+Q++ DS +LA+ISG S +SLY TS G   WKYDA  E  SC+RRDP+D+R
Sbjct: 128  L-GIQDLCWVQARHDSHVLAAISGSSFLSLYTTSGG-LFWKYDAGTEILSCLRRDPYDSR 185

Query: 621  HFCVLGLKGFLLSAKLLGENEDDVVIKERQIPINDSNELQRPE-------TVNFSAPALG 779
            HFCVLGLKGFLLS K+LG++E+DVVI+E QI   D +EL R E         + S+PA  
Sbjct: 186  HFCVLGLKGFLLSVKVLGDSENDVVIQEMQIK-TDFSELPRLEREAASNGNSSSSSPASA 244

Query: 780  AFPNYLVKLCFSPQWKHILFLSFPKELVVFDLQYETSLSSFGLPRGCGKFIDVVPDPDNE 959
            AFP Y  +  FSP WK+ILF++FP+EL+VFDLQYET LS+  LPRGC KF+D++PDP+ E
Sbjct: 245  AFPLYFARFAFSPHWKNILFVTFPRELLVFDLQYETPLSTTPLPRGCAKFLDILPDPNKE 304

Query: 960  LIYCAHADGKLSIWRRKEGEQVYIMCTMEELMPSIGTPVPSPMILAVVLCQSESTLRSVG 1139
            L+YC H DG+LSIWRRKEGEQV++MCTMEE MPSIG  +PSP  LAV+L  S+ST++++ 
Sbjct: 305  LLYCGHVDGRLSIWRRKEGEQVHVMCTMEEFMPSIGMSIPSPSALAVLLSHSDSTMQTI- 363

Query: 1140 NFNSDMSPMSVFSKDHDSHTEFPSKSHNVSKSYLISLSDDGNVWSWLLTAEGARDPQKVF 1319
               + + P    S D D+  +F  +S  VSK+  ISLSDDG +W W+L+AEG  D  K  
Sbjct: 364  ---TKIHPDGTSSIDFDNPFDFYDESLLVSKTTFISLSDDGKIWKWVLSAEGVEDALKNA 420

Query: 1320 TSVNRDAAVTEATDPDTHTNTTDSSI------------RGSTSGAVKDSEPMNDISRRLI 1463
            + ++     TEA  P        SS+            RG TSG+   S   +D+S +  
Sbjct: 421  SDLDMGIGATEAALPGAIQENDSSSLDDELVVAPTNRSRGHTSGS---SMEKSDLSFKKF 477

Query: 1464 NTTSSNVNF--TFKINLVGQLHLLSSTVTVIAVPSPSLTATLARGGNNPAVAVPLVALGT 1637
              T +      + +I+L GQL LLSSTV+ +AVPSPSLTATLARGGN PA AVPLVALGT
Sbjct: 478  GVTRAYTCLLRSMQISLTGQLQLLSSTVSTLAVPSPSLTATLARGGNIPAAAVPLVALGT 537

Query: 1638 QGGTIDVIDXXXXXXXXXXXXHNTLIRGLRWLGNSRLVSFSYS 1766
            Q GTIDV+D            H  ++RGLRWLGNSRLVSFSYS
Sbjct: 538  QSGTIDVVDVSTNAVAASTSVHTGVVRGLRWLGNSRLVSFSYS 580