BLASTX nr result

ID: Coptis21_contig00029004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029004
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527964.1| PREDICTED: transcription factor LAF1-like [G...   229   2e-58
ref|XP_003522557.1| PREDICTED: uncharacterized protein LOC100817...   229   2e-58
ref|XP_002278632.2| PREDICTED: transcriptional activator Myb-lik...   228   5e-58
ref|XP_002307474.1| predicted protein [Populus trichocarpa] gi|2...   227   7e-58
gb|ABD60294.2| R2R3-MYB transcription factor MYB3 [Picea glauca]      225   3e-57

>ref|XP_003527964.1| PREDICTED: transcription factor LAF1-like [Glycine max]
          Length = 331

 Score =  229 bits (583), Expect = 2e-58
 Identities = 106/126 (84%), Positives = 112/126 (88%)
 Frame = +3

Query: 6   CPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRKPFTX 185
           CPRGHWRPAEDEKLRQLVEQYG QNWNSIAEKLQGRSGKSCRLRWFNQLDPRINR+PFT 
Sbjct: 13  CPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTE 72

Query: 186 XXXXRLLAAHRIHGNKWALIARLFPGRTDNSVKNHWHVIMARRQRERSKLYGKRSSHDFF 365
               RLLAAHRIHGNKWALIARLFPGRTDN+VKNHWHVIMAR+QRE+SKL GKRS  D +
Sbjct: 73  EEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRSFQDVY 132

Query: 366 HSVTGT 383
           +    T
Sbjct: 133 NDSNNT 138


>ref|XP_003522557.1| PREDICTED: uncharacterized protein LOC100817328 [Glycine max]
          Length = 338

 Score =  229 bits (583), Expect = 2e-58
 Identities = 106/126 (84%), Positives = 112/126 (88%)
 Frame = +3

Query: 6   CPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRKPFTX 185
           CPRGHWRPAEDEKLRQLVEQYG QNWNSIAEKLQGRSGKSCRLRWFNQLDPRINR+PFT 
Sbjct: 13  CPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTE 72

Query: 186 XXXXRLLAAHRIHGNKWALIARLFPGRTDNSVKNHWHVIMARRQRERSKLYGKRSSHDFF 365
               RLLAAHRIHGNKWALIARLFPGRTDN+VKNHWHVIMAR+QRE+SKL GKRS  D +
Sbjct: 73  EEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRSFQDVY 132

Query: 366 HSVTGT 383
           +    T
Sbjct: 133 NDSNNT 138


>ref|XP_002278632.2| PREDICTED: transcriptional activator Myb-like [Vitis vinifera]
           gi|302142744|emb|CBI19947.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  228 bits (580), Expect = 5e-58
 Identities = 108/132 (81%), Positives = 114/132 (86%)
 Frame = +3

Query: 6   CPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRKPFTX 185
           CPRGHWRPAEDEKLRQLVE+YG QNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRKPFT 
Sbjct: 11  CPRGHWRPAEDEKLRQLVEEYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRKPFTE 70

Query: 186 XXXXRLLAAHRIHGNKWALIARLFPGRTDNSVKNHWHVIMARRQRERSKLYGKRSSHDFF 365
               RLLAAHRIHGNKWALI+RLFPGRTDN+VKNHWHVIMAR+QRE+SKL GKRS  D  
Sbjct: 71  EEEERLLAAHRIHGNKWALISRLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRSYKDVL 130

Query: 366 HSVTGTTTSNSF 401
                 T+SN F
Sbjct: 131 SD--SNTSSNGF 140


>ref|XP_002307474.1| predicted protein [Populus trichocarpa] gi|222856923|gb|EEE94470.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  227 bits (579), Expect = 7e-58
 Identities = 106/131 (80%), Positives = 114/131 (87%)
 Frame = +3

Query: 6   CPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRKPFTX 185
           CPRGHWRPAED+KLRQLVEQYG QNWNSIAEKLQGRSGKSCRLRWFNQLDPRINR+PF+ 
Sbjct: 18  CPRGHWRPAEDDKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFSE 77

Query: 186 XXXXRLLAAHRIHGNKWALIARLFPGRTDNSVKNHWHVIMARRQRERSKLYGKRSSHDFF 365
               RLLAAHRIHGNKWALIARLFPGRTDN+VKNHWHVIMARRQRE+SKL GKRS  D  
Sbjct: 78  EEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARRQREQSKLCGKRSYQDNL 137

Query: 366 HSVTGTTTSNS 398
                T +S++
Sbjct: 138 SESNATNSSHA 148


>gb|ABD60294.2| R2R3-MYB transcription factor MYB3 [Picea glauca]
          Length = 156

 Score =  225 bits (573), Expect = 3e-57
 Identities = 101/116 (87%), Positives = 109/116 (93%)
 Frame = +3

Query: 6   CPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRKPFTX 185
           CPRGHWRPAEDEKLR+LVEQYGPQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINR+PFT 
Sbjct: 17  CPRGHWRPAEDEKLRELVEQYGPQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTE 76

Query: 186 XXXXRLLAAHRIHGNKWALIARLFPGRTDNSVKNHWHVIMARRQRERSKLYGKRSS 353
               RLLAAHR+HGNKWA+IARLFPGRTDN+VKNHWHVIMAR+ RERS++YGKR S
Sbjct: 77  EEEERLLAAHRLHGNKWAMIARLFPGRTDNAVKNHWHVIMARKFRERSRIYGKRRS 132


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