BLASTX nr result

ID: Coptis21_contig00028995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028995
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318301.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-20
gb|ABK94145.1| unknown [Populus trichocarpa]                          100   9e-20
ref|XP_002322380.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_002322379.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
emb|CBI39004.3| unnamed protein product [Vitis vinifera]               97   2e-18

>ref|XP_002318301.1| predicted protein [Populus trichocarpa] gi|222858974|gb|EEE96521.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score =  100 bits (250), Expect = 9e-20
 Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
 Frame = -2

Query: 406 SRKNSNLSAIAEAMLAQKNVESVLFRGKKVVEKTNSDKLDWFAGELIKEHERRKFSILPV 227
           S K ++L A+   MLAQKNVESVLF GKK+VE TN DKL+ F GELIKE ERRK SILP 
Sbjct: 355 SNKKADLLAMTAEMLAQKNVESVLFEGKKIVESTNFDKLETFTGELIKEQERRKTSILPT 414

Query: 226 VVFKQS--SPRTSSA-TVSTISSH 164
           VV KQ+  SPRTSSA T+ST+SS+
Sbjct: 415 VVLKQNSPSPRTSSATTLSTLSSY 438


>gb|ABK94145.1| unknown [Populus trichocarpa]
          Length = 222

 Score =  100 bits (250), Expect = 9e-20
 Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
 Frame = -2

Query: 406 SRKNSNLSAIAEAMLAQKNVESVLFRGKKVVEKTNSDKLDWFAGELIKEHERRKFSILPV 227
           S K ++L A+   MLAQKNVESVLF GKK+VE TN DKL+ F GELIKE ERRK SILP 
Sbjct: 139 SNKKADLLAMTAEMLAQKNVESVLFEGKKIVESTNFDKLETFTGELIKEQERRKTSILPT 198

Query: 226 VVFKQS--SPRTSSA-TVSTISSH 164
           VV KQ+  SPRTSSA T+ST+SS+
Sbjct: 199 VVLKQNSPSPRTSSATTLSTLSSY 222


>ref|XP_002322380.1| predicted protein [Populus trichocarpa] gi|222869376|gb|EEF06507.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
 Frame = -2

Query: 406 SRKNSNLSAIAEAMLAQKNVESVLFRGKKVVEKTNSDKLDWFAGELIKEHERRKFSILPV 227
           S K ++L A+   MLAQKNVESVLF GKK+VE TN DKL+ F+GELIKE ERRK SILP 
Sbjct: 355 SNKKADLLAMTAEMLAQKNVESVLFEGKKIVESTNHDKLETFSGELIKEQERRKTSILPP 414

Query: 226 VVFKQS--SPRTSSAT-VSTISSH 164
           VV KQ+  SPRTSSAT +ST SS+
Sbjct: 415 VVLKQNSPSPRTSSATSLSTSSSY 438


>ref|XP_002322379.1| predicted protein [Populus trichocarpa] gi|222869375|gb|EEF06506.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
 Frame = -2

Query: 406 SRKNSNLSAIAEAMLAQKNVESVLFRGKKVVEKTNSDKLDWFAGELIKEHERRKFSILPV 227
           S K ++L A+   MLAQKNVESVLF GKK+VE TN DKL+ F+GELIKE ERRK SILP 
Sbjct: 355 SNKKADLLAMTAEMLAQKNVESVLFEGKKIVESTNHDKLETFSGELIKEQERRKTSILPP 414

Query: 226 VVFKQS--SPRTSSAT-VSTISSH 164
           VV KQ+  SPRTSSAT +ST SS+
Sbjct: 415 VVLKQNSPSPRTSSATSLSTSSSY 438


>emb|CBI39004.3| unnamed protein product [Vitis vinifera]
          Length = 417

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 53/83 (63%), Positives = 65/83 (78%), Gaps = 3/83 (3%)
 Frame = -2

Query: 403 RKNSNLSAIAEAMLAQKNVESVLFRGKKVVEKTNSDKLDWFAGELIKEHERRKFSILPVV 224
           + +  L  + E ML QKNVESVLF GKK+VEKTNS+KL WFA E++KE ERRK SILP V
Sbjct: 335 KDSKQLVGMTEEMLEQKNVESVLFSGKKLVEKTNSEKLQWFAAEIMKEKERRKTSILPTV 394

Query: 223 VFKQS--SPRTSSA-TVSTISSH 164
           V KQ+  SPRTSSA T+S++SS+
Sbjct: 395 VLKQASHSPRTSSATTLSSMSSN 417


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