BLASTX nr result

ID: Coptis21_contig00028992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028992
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280757.2| PREDICTED: uncharacterized protein LOC100261...   208   3e-52
emb|CBI26899.3| unnamed protein product [Vitis vinifera]              208   3e-52
ref|XP_003528540.1| PREDICTED: uncharacterized protein LOC100778...   207   7e-52
ref|XP_002311502.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50
ref|XP_002526026.1| uridine cytidine kinase I, putative [Ricinus...   203   1e-50

>ref|XP_002280757.2| PREDICTED: uncharacterized protein LOC100261233 [Vitis vinifera]
          Length = 951

 Score =  208 bits (530), Expect = 3e-52
 Identities = 104/146 (71%), Positives = 119/146 (81%), Gaps = 1/146 (0%)
 Frame = +3

Query: 15  MDDEVVQRVFEEGGRDYXXXXXXXXXXXXXXXXXXX-HVSFDHGFYLLVKALQELREKKD 191
           MDDEVVQR F+EGGRDY                    HVSFDHG+YLLVK++QELREKKD
Sbjct: 1   MDDEVVQRAFQEGGRDYYQQQPSTSSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKD 60

Query: 192 GLVTVGIGGPSGSGKTSLSEKVASVIGCEVVSMENYRDGLDDGNDLDSIDFDTLVRNLED 371
           GLVTVGIGGPSGSGK+SL+EKVASVIGC VVSMENYRDG+DDGNDL+SIDFD LV NLED
Sbjct: 61  GLVTVGIGGPSGSGKSSLAEKVASVIGCTVVSMENYRDGVDDGNDLNSIDFDALVSNLED 120

Query: 372 LMKGKDVVMPLFDFQEKRRVGSKTLK 449
           L++GKD ++P+FDFQEKRRV S+ +K
Sbjct: 121 LIRGKDTLIPVFDFQEKRRVDSRAIK 146



 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/109 (44%), Positives = 70/109 (64%), Gaps = 4/109 (3%)
 Frame = +3

Query: 135 DHGFYLLVKALQELREKKDGLVTVGIGGPSGSGKTSLSEKVASVIGCEVVSMENY--RDG 308
           D G  L V+A+Q L E K   V VGIGGPSGSGKTSL+ K+A+++GCEVVS+E+Y   + 
Sbjct: 499 DRGLLLSVQAIQALLENKGLPVIVGIGGPSGSGKTSLAHKMANIVGCEVVSLESYYKSEH 558

Query: 309 LDD--GNDLDSIDFDTLVRNLEDLMKGKDVVMPLFDFQEKRRVGSKTLK 449
           + D   +D  S+D   L +N++D+   +   +P+FD +   R G K L+
Sbjct: 559 VKDFKCDDFSSLDLSLLSKNIDDVKNCRRTKVPIFDLETGARSGFKELE 607


>emb|CBI26899.3| unnamed protein product [Vitis vinifera]
          Length = 981

 Score =  208 bits (530), Expect = 3e-52
 Identities = 104/146 (71%), Positives = 119/146 (81%), Gaps = 1/146 (0%)
 Frame = +3

Query: 15  MDDEVVQRVFEEGGRDYXXXXXXXXXXXXXXXXXXX-HVSFDHGFYLLVKALQELREKKD 191
           MDDEVVQR F+EGGRDY                    HVSFDHG+YLLVK++QELREKKD
Sbjct: 1   MDDEVVQRAFQEGGRDYYQQQPSTSSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKD 60

Query: 192 GLVTVGIGGPSGSGKTSLSEKVASVIGCEVVSMENYRDGLDDGNDLDSIDFDTLVRNLED 371
           GLVTVGIGGPSGSGK+SL+EKVASVIGC VVSMENYRDG+DDGNDL+SIDFD LV NLED
Sbjct: 61  GLVTVGIGGPSGSGKSSLAEKVASVIGCTVVSMENYRDGVDDGNDLNSIDFDALVSNLED 120

Query: 372 LMKGKDVVMPLFDFQEKRRVGSKTLK 449
           L++GKD ++P+FDFQEKRRV S+ +K
Sbjct: 121 LIRGKDTLIPVFDFQEKRRVDSRAIK 146



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 33/138 (23%)
 Frame = +3

Query: 135 DHGFYLLVKALQELREKKDGLVTVGIG-----------------------------GPSG 227
           D G  L V+A+Q L E K   V VGIG                             GPSG
Sbjct: 497 DRGLLLSVQAIQALLENKGLPVIVGIGNMEINQLFKFVITYFQFSGRVGSHPAIHGGPSG 556

Query: 228 SGKTSLSEKVASVIGCEVVSMENY--RDGLDD--GNDLDSIDFDTLVRNLEDLMKGKDVV 395
           SGKTSL+ K+A+++GCEVVS+E+Y   + + D   +D  S+D   L +N++D+   +   
Sbjct: 557 SGKTSLAHKMANIVGCEVVSLESYYKSEHVKDFKCDDFSSLDLSLLSKNIDDVKNCRRTK 616

Query: 396 MPLFDFQEKRRVGSKTLK 449
           +P+FD +   R G K L+
Sbjct: 617 VPIFDLETGARSGFKELE 634


>ref|XP_003528540.1| PREDICTED: uncharacterized protein LOC100778905 [Glycine max]
          Length = 945

 Score =  207 bits (527), Expect = 7e-52
 Identities = 103/146 (70%), Positives = 117/146 (80%), Gaps = 1/146 (0%)
 Frame = +3

Query: 15  MDDEVVQRVFEEGGRDYXXXXXXXXXXXXXXXXXXX-HVSFDHGFYLLVKALQELREKKD 191
           MDDEVVQRVF EGGRDY                    HVSFDHG+YLLVK++QELREKKD
Sbjct: 1   MDDEVVQRVFHEGGRDYFQQQPSTSSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKD 60

Query: 192 GLVTVGIGGPSGSGKTSLSEKVASVIGCEVVSMENYRDGLDDGNDLDSIDFDTLVRNLED 371
           GLVTVGIGGPSGSGKTSL+EKVASVIGC V+SMENYRDG+D+GND+DSIDFDTL++NLED
Sbjct: 61  GLVTVGIGGPSGSGKTSLTEKVASVIGCTVISMENYRDGVDEGNDVDSIDFDTLIKNLED 120

Query: 372 LMKGKDVVMPLFDFQEKRRVGSKTLK 449
           L KG D  +P FD+Q+KRRVG K +K
Sbjct: 121 LTKGNDTSIPEFDYQQKRRVGYKAIK 146



 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/107 (45%), Positives = 70/107 (65%), Gaps = 2/107 (1%)
 Frame = +3

Query: 135 DHGFYLLVKALQELREKKDGLVTVGIGGPSGSGKTSLSEKVASVIGCEVVSMENYRDGLD 314
           D G  L V+A+Q L E K   V VGIGGPSGSGKTSL+ K+A++IGCEVVS+E+Y   + 
Sbjct: 494 DRGLLLAVQAIQALLENKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKQVK 553

Query: 315 D--GNDLDSIDFDTLVRNLEDLMKGKDVVMPLFDFQEKRRVGSKTLK 449
           D   +D  ++D   L +N++D+  G+   +P+FD +   R G K L+
Sbjct: 554 DFKYDDFSALDLSLLSKNIDDIRNGQRTKVPIFDLESGARSGFKELE 600


>ref|XP_002311502.1| predicted protein [Populus trichocarpa] gi|222851322|gb|EEE88869.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  203 bits (517), Expect = 1e-50
 Identities = 102/150 (68%), Positives = 119/150 (79%), Gaps = 5/150 (3%)
 Frame = +3

Query: 15  MDDEVVQRVFEEGGRDYXXXXXXXXXXXXXXXXXXX-----HVSFDHGFYLLVKALQELR 179
           MDDEVVQR+F EGGRDY                        HVSFDHG+YLLVK+LQELR
Sbjct: 1   MDDEVVQRLFHEGGRDYFQQQPSTSSSSSSSSSSILQSLPLHVSFDHGYYLLVKSLQELR 60

Query: 180 EKKDGLVTVGIGGPSGSGKTSLSEKVASVIGCEVVSMENYRDGLDDGNDLDSIDFDTLVR 359
           EKK+GLVTVGIGGPSGSGKTSL+EKVASVIGC+V+SMENYR G+DD +DLDSIDFD LV+
Sbjct: 61  EKKEGLVTVGIGGPSGSGKTSLAEKVASVIGCDVISMENYRTGVDDVSDLDSIDFDALVQ 120

Query: 360 NLEDLMKGKDVVMPLFDFQEKRRVGSKTLK 449
           NLEDL KGKD ++P+FD+Q+KRR+GSK +K
Sbjct: 121 NLEDLTKGKDTLIPVFDYQQKRRIGSKGIK 150


>ref|XP_002526026.1| uridine cytidine kinase I, putative [Ricinus communis]
           gi|223534673|gb|EEF36366.1| uridine cytidine kinase I,
           putative [Ricinus communis]
          Length = 975

 Score =  203 bits (516), Expect = 1e-50
 Identities = 98/145 (67%), Positives = 117/145 (80%)
 Frame = +3

Query: 15  MDDEVVQRVFEEGGRDYXXXXXXXXXXXXXXXXXXXHVSFDHGFYLLVKALQELREKKDG 194
           M+DEVVQRV +EGGRDY                   HVSFDHG+YLLVK++QELREKK+G
Sbjct: 1   MEDEVVQRVLQEGGRDYFQQTPSTSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKEG 60

Query: 195 LVTVGIGGPSGSGKTSLSEKVASVIGCEVVSMENYRDGLDDGNDLDSIDFDTLVRNLEDL 374
            VTVGIGGPSGSGKTSL+EKVASVIGC V+SMENYR G+DDGNDLDSIDFD LV+NLEDL
Sbjct: 61  FVTVGIGGPSGSGKTSLAEKVASVIGCTVISMENYRVGVDDGNDLDSIDFDGLVQNLEDL 120

Query: 375 MKGKDVVMPLFDFQEKRRVGSKTLK 449
           +KG D  +P+FD+Q+K+RVGS+ ++
Sbjct: 121 LKGNDTSIPVFDYQQKKRVGSQAIQ 145



 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 50/111 (45%), Positives = 72/111 (64%), Gaps = 4/111 (3%)
 Frame = +3

Query: 126 VSFDHGFYLLVKALQELREKKDGLVTVGIGGPSGSGKTSLSEKVASVIGCEVVSMENY-- 299
           V+ D G  L V+A+Q L E K   V VGIGGPSGSGKTSL+ K+A+++GCEVVS+E+Y  
Sbjct: 454 VNLDRGLLLAVQAIQVLLEHKGPPVIVGIGGPSGSGKTSLAHKMANIVGCEVVSLESYFI 513

Query: 300 RDGLDD--GNDLDSIDFDTLVRNLEDLMKGKDVVMPLFDFQEKRRVGSKTL 446
            + + D   +D  S+D   L +N++D+  G+   +P+FD +   R G K L
Sbjct: 514 SEQVKDFKHDDFRSLDLSLLAKNIDDIKHGRRTKVPIFDLETGARSGFKEL 564


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