BLASTX nr result

ID: Coptis21_contig00028983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028983
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU52640.1| beta-1,3-glucanase 5 [Solanum tuberosum]               167   8e-40
ref|XP_002525335.1| Glucan endo-1,3-beta-glucosidase precursor, ...   163   2e-38
ref|XP_002274828.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   162   3e-38
ref|XP_002302861.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38
ref|XP_002333242.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-38

>gb|AFU52640.1| beta-1,3-glucanase 5 [Solanum tuberosum]
          Length = 477

 Score =  167 bits (423), Expect = 8e-40
 Identities = 82/122 (67%), Positives = 102/122 (83%), Gaps = 5/122 (4%)
 Frame = +1

Query: 61  MDRLTIILCFISIFI-----LADAGQIGVNYGRVANNLPSAVKVVQLLKSQGIERVKLYD 225
           M++LTI L   +  +     +ADAG IG+NYGRVANNLPSAVKV+ LLKSQG+ERVK+YD
Sbjct: 1   MEKLTICLLLFAFSLSLFSSIADAGSIGINYGRVANNLPSAVKVIALLKSQGVERVKVYD 60

Query: 226 TDPSVLKALAGSNIEVTVALPNELLYSVSKTKSFAFKWVQKNILSYYPSTQIHAIAVGNE 405
           TDP+VLKAL+GS+I+VTV LPNELLY+ +K  SFA+ WV+KN+ +YYPSTQI +IAVGNE
Sbjct: 61  TDPAVLKALSGSDIKVTVNLPNELLYNAAKRPSFAYSWVEKNVAAYYPSTQIESIAVGNE 120

Query: 406 VF 411
           VF
Sbjct: 121 VF 122


>ref|XP_002525335.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis] gi|223535394|gb|EEF37068.1| Glucan
           endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis]
          Length = 495

 Score =  163 bits (412), Expect = 2e-38
 Identities = 78/114 (68%), Positives = 96/114 (84%)
 Frame = +1

Query: 70  LTIILCFISIFILADAGQIGVNYGRVANNLPSAVKVVQLLKSQGIERVKLYDTDPSVLKA 249
           ++ +L  +S F  ADAG IGVNYGR+A+NLPSA KVVQLLKSQG++RVK++D DP+VLKA
Sbjct: 6   ISSLLLLLSTFTFADAGSIGVNYGRIADNLPSATKVVQLLKSQGLQRVKVFDADPAVLKA 65

Query: 250 LAGSNIEVTVALPNELLYSVSKTKSFAFKWVQKNILSYYPSTQIHAIAVGNEVF 411
           L+G+ I+VTV LPNELLYS +K  SFAF WVQ+N+  YYPST+I AIAVGNEVF
Sbjct: 66  LSGTRIKVTVDLPNELLYSAAKRPSFAFSWVQRNVAVYYPSTEIEAIAVGNEVF 119


>ref|XP_002274828.1| PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Vitis vinifera]
          Length = 471

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/110 (74%), Positives = 93/110 (84%)
 Frame = +1

Query: 82  LCFISIFILADAGQIGVNYGRVANNLPSAVKVVQLLKSQGIERVKLYDTDPSVLKALAGS 261
           L  ISIF  ADAG IGVNYGR+ANNLPSAVKVVQLLKSQGIERVK++DTDP+VLKAL  S
Sbjct: 10  LLVISIFAFADAGSIGVNYGRIANNLPSAVKVVQLLKSQGIERVKVFDTDPAVLKALGES 69

Query: 262 NIEVTVALPNELLYSVSKTKSFAFKWVQKNILSYYPSTQIHAIAVGNEVF 411
            I+VTV LPNELL S +K +SFA  WVQKN+  Y+P+T+I AIAVGNEVF
Sbjct: 70  GIKVTVDLPNELLISAAKRQSFANTWVQKNVADYFPATKIEAIAVGNEVF 119


>ref|XP_002302861.1| predicted protein [Populus trichocarpa] gi|222844587|gb|EEE82134.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  161 bits (407), Expect = 6e-38
 Identities = 79/114 (69%), Positives = 94/114 (82%)
 Frame = +1

Query: 70  LTIILCFISIFILADAGQIGVNYGRVANNLPSAVKVVQLLKSQGIERVKLYDTDPSVLKA 249
           L+  L  + IF  ADAG IGVNYGR+ANNLP+A KVVQL+KSQG+ER+K+YDTDP VLKA
Sbjct: 6   LSSFLVLVCIFTSADAGSIGVNYGRIANNLPAAAKVVQLVKSQGLERIKVYDTDPIVLKA 65

Query: 250 LAGSNIEVTVALPNELLYSVSKTKSFAFKWVQKNILSYYPSTQIHAIAVGNEVF 411
           L+G  I+VTV LPNELLYS +K   FA  WVQKN+++Y+PSTQI AIAVGNEVF
Sbjct: 66  LSGCGIKVTVDLPNELLYSAAKNPYFARTWVQKNVVAYHPSTQIEAIAVGNEVF 119


>ref|XP_002333242.1| predicted protein [Populus trichocarpa]
           gi|224129034|ref|XP_002320484.1| predicted protein
           [Populus trichocarpa] gi|118480997|gb|ABK92452.1|
           unknown [Populus trichocarpa]
           gi|222835778|gb|EEE74213.1| predicted protein [Populus
           trichocarpa] gi|222861257|gb|EEE98799.1| predicted
           protein [Populus trichocarpa]
          Length = 470

 Score =  160 bits (406), Expect = 8e-38
 Identities = 78/114 (68%), Positives = 95/114 (83%)
 Frame = +1

Query: 70  LTIILCFISIFILADAGQIGVNYGRVANNLPSAVKVVQLLKSQGIERVKLYDTDPSVLKA 249
           L   L  + +   ADAG +GVNYGR+ANNLPSAVKVV L+KSQG+ERVK+YDTDP+VLKA
Sbjct: 6   LPCFLLLLCVVAFADAGSVGVNYGRIANNLPSAVKVVNLVKSQGLERVKVYDTDPAVLKA 65

Query: 250 LAGSNIEVTVALPNELLYSVSKTKSFAFKWVQKNILSYYPSTQIHAIAVGNEVF 411
           L+GS I+VTV LPN+LLYS +K  +FA  WVQKNI++Y+PSTQI +IAVGNEVF
Sbjct: 66  LSGSGIKVTVDLPNQLLYSAAKYPNFARSWVQKNIVAYHPSTQIESIAVGNEVF 119


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