BLASTX nr result

ID: Coptis21_contig00028982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028982
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315457.1| predicted protein [Populus trichocarpa] gi|2...   131   2e-28
ref|XP_002273982.1| PREDICTED: major allergen Pru ar 1 [Vitis vi...   129   6e-28
gb|ACE80953.1| putative allergen Pru p 1.06C [Prunus dulcis x Pr...   129   8e-28
gb|ACE80952.1| putative allergen Pru p 1.06A [Prunus dulcis x Pr...   129   1e-27
emb|CAN67367.1| hypothetical protein VITISV_007417 [Vitis vinifera]   129   1e-27

>ref|XP_002315457.1| predicted protein [Populus trichocarpa] gi|222864497|gb|EEF01628.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  131 bits (329), Expect = 2e-28
 Identities = 70/156 (44%), Positives = 98/156 (62%), Gaps = 4/156 (2%)
 Frame = -2

Query: 606 SFSDEFTSPIPPKRFWAAAIVDSHNIIPKIAPQYIENIEL-EGDGGVGTIKTFKFGPAVK 430
           +FSDEFTSP+PP R + A I+DS N++PK+ PQ I+++E  +G+G  G+I+   F   + 
Sbjct: 5   AFSDEFTSPVPPARLFKALILDSGNLLPKLLPQLIKSVEFTQGNGEAGSIRQISFQDGI- 63

Query: 429 DVTVVKNRVDVLDAENFLYKYTVVGGSG---KFETANFQIKLDTSEDGGSVCKICGEYTT 259
            +T VKNRV+ +D ENF Y Y+++ G G   K ET  ++++     DGGS+ K+   Y T
Sbjct: 64  GLTSVKNRVEAVDPENFSYSYSLIEGEGLLDKMETIVYEVQFVPGPDGGSINKMKSTYHT 123

Query: 258 VGDYVPTEAEGSAAKGGTVRMLKAVEGYLLAKPEAY 151
            GD V TE E    K   + M KAVE YLL  PEAY
Sbjct: 124 KGDIVLTEEEVKEGKEKALGMYKAVEAYLLQNPEAY 159


>ref|XP_002273982.1| PREDICTED: major allergen Pru ar 1 [Vitis vinifera]
           gi|296083303|emb|CBI22939.3| unnamed protein product
           [Vitis vinifera]
          Length = 159

 Score =  129 bits (325), Expect = 6e-28
 Identities = 70/156 (44%), Positives = 96/156 (61%), Gaps = 4/156 (2%)
 Frame = -2

Query: 606 SFSDEFTSPIPPKRFWAAAIVDSHNIIPKIAPQYIENIEL-EGDGGVGTIKTFKFGPAVK 430
           S+  E  S IPP + + A I+DS N+IPK+ PQ I+ +E+ EGDGG G+IK   FG    
Sbjct: 5   SYEHEIISSIPPAKIFKAFILDSDNLIPKVLPQAIKCVEIIEGDGGPGSIKKITFGEG-S 63

Query: 429 DVTVVKNRVDVLDAENFLYKYTVVGGS---GKFETANFQIKLDTSEDGGSVCKICGEYTT 259
               VK+RVD +D ENF Y Y+V+ G    G  E+ ++++KL  S  GGS+CK   +Y T
Sbjct: 64  QFNYVKHRVDGIDKENFTYSYSVIEGDALMGTLESISYEVKLVASPSGGSICKSTSKYHT 123

Query: 258 VGDYVPTEAEGSAAKGGTVRMLKAVEGYLLAKPEAY 151
            GD+  TE +  A K   + + KAVE YLLA P+AY
Sbjct: 124 KGDFEITEDQIKAGKEKALGLFKAVEAYLLANPDAY 159


>gb|ACE80953.1| putative allergen Pru p 1.06C [Prunus dulcis x Prunus persica]
          Length = 160

 Score =  129 bits (324), Expect = 8e-28
 Identities = 70/156 (44%), Positives = 97/156 (62%), Gaps = 4/156 (2%)
 Frame = -2

Query: 606 SFSDEFTSPIPPKRFWAAAIVDSHNIIPKIAPQYIENIEL-EGDGGVGTIKTFKFGPAVK 430
           ++SDE TS IPP R + A ++++  +IPKIAPQ +++ E+ EGDGGVGTIK   FG    
Sbjct: 5   TYSDESTSVIPPPRLFKALVLEADTLIPKIAPQSVKSAEIVEGDGGVGTIKKISFGEG-S 63

Query: 429 DVTVVKNRVDVLDAENFLYKYTVVGG---SGKFETANFQIKLDTSEDGGSVCKICGEYTT 259
             + VK+R+D LD +NF+Y YT+V G   S K E  +++IKL  S DGGS+ K    Y T
Sbjct: 64  HYSYVKHRIDGLDKDNFVYSYTLVEGDALSDKVEKISYEIKLVASADGGSIIKSSSNYHT 123

Query: 258 VGDYVPTEAEGSAAKGGTVRMLKAVEGYLLAKPEAY 151
            GD    E +  A K     + K +E YL+A P+AY
Sbjct: 124 AGDVEIKEEDVKAGKEKATGLFKLIENYLVANPDAY 159


>gb|ACE80952.1| putative allergen Pru p 1.06A [Prunus dulcis x Prunus persica]
          Length = 160

 Score =  129 bits (323), Expect = 1e-27
 Identities = 71/156 (45%), Positives = 97/156 (62%), Gaps = 4/156 (2%)
 Frame = -2

Query: 606 SFSDEFTSPIPPKRFWAAAIVDSHNIIPKIAPQYIENIEL-EGDGGVGTIKTFKFGPAVK 430
           ++SDE TS IPP R + A ++++  +IPKIAPQ +++ E+ EGDGGVGTIK   FG    
Sbjct: 5   TYSDESTSVIPPPRLFKALVLEADTLIPKIAPQSVKSAEIVEGDGGVGTIKKISFGEG-S 63

Query: 429 DVTVVKNRVDVLDAENFLYKYTVVGG---SGKFETANFQIKLDTSEDGGSVCKICGEYTT 259
             + VK+R+D LD +NF+Y YT+V G   S K E  +++IKL  S DGGSV K    Y T
Sbjct: 64  HYSYVKHRIDGLDKDNFVYSYTLVEGDALSDKVEKISYEIKLVASADGGSVIKSTSNYHT 123

Query: 258 VGDYVPTEAEGSAAKGGTVRMLKAVEGYLLAKPEAY 151
            GD    E +  A K     + K +E YL+A P+AY
Sbjct: 124 KGDVEIKEEDVKAGKEKATGLFKLIENYLVANPDAY 159


>emb|CAN67367.1| hypothetical protein VITISV_007417 [Vitis vinifera]
          Length = 159

 Score =  129 bits (323), Expect = 1e-27
 Identities = 69/156 (44%), Positives = 97/156 (62%), Gaps = 4/156 (2%)
 Frame = -2

Query: 606 SFSDEFTSPIPPKRFWAAAIVDSHNIIPKIAPQYIENIEL-EGDGGVGTIKTFKFGPAVK 430
           S+  E  S IPP + + A I+DS N+IPK+ PQ I+ +E+ EGDGG G+IK   FG    
Sbjct: 5   SYEHEIISSIPPAKIFKAFILDSDNLIPKVLPQAIKCVEIIEGDGGPGSIKKITFGEG-S 63

Query: 429 DVTVVKNRVDVLDAENFLYKYTVVGGS---GKFETANFQIKLDTSEDGGSVCKICGEYTT 259
               VK+RVD +D ENF Y Y+++ G    G  E+ ++++KL  S +GGS+CK   +Y T
Sbjct: 64  QFNYVKHRVDGIDKENFTYSYSLIEGDALMGTLESISYEVKLVASPNGGSICKSTSKYHT 123

Query: 258 VGDYVPTEAEGSAAKGGTVRMLKAVEGYLLAKPEAY 151
            GD+  TE +  A K   + + KAVE YLLA P+AY
Sbjct: 124 KGDFEITEDQIKAGKEKAMGLFKAVEAYLLANPDAY 159


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