BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028979
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273486.1| PREDICTED: chaperone activity of bc1 complex...   441   e-121
ref|XP_002515159.1| Ubiquinone biosynthesis protein coq-8, putat...   424   e-116
ref|XP_003535303.1| PREDICTED: chaperone activity of bc1 complex...   422   e-116
ref|XP_003519721.1| PREDICTED: chaperone activity of bc1 complex...   422   e-116
ref|XP_002874966.1| ABC1 protein [Arabidopsis lyrata subsp. lyra...   410   e-112

>ref|XP_002273486.1| PREDICTED: chaperone activity of bc1 complex-like, mitochondrial
            [Vitis vinifera] gi|297744068|emb|CBI37038.3| unnamed
            protein product [Vitis vinifera]
          Length = 583

 Score =  441 bits (1135), Expect = e-121
 Identities = 213/279 (76%), Positives = 245/279 (87%)
 Frame = +2

Query: 2    LLDYTNLLPKGLYLDSAMKVAEEELARECDYELEASNQKRFYDLLSNTEGFYVPIVIDDI 181
            LLDYTNL+P+GLYLD AMKVA+EEL+RECDYELEA+NQKRF DLLS ++GFYVP+VIDDI
Sbjct: 305  LLDYTNLIPEGLYLDKAMKVAKEELSRECDYELEATNQKRFCDLLSKSKGFYVPMVIDDI 364

Query: 182  LTKRIITTELVTGVPIDKVALLSQETRDYVGXXXXXXXXXXXFVFRFMQTDPNWSNFLYE 361
             +KR++TTELV+G+PIDKVALL+Q TR+YVG           FVFRFMQTDPNWSNFLY+
Sbjct: 365  SSKRVLTTELVSGIPIDKVALLNQGTRNYVGKKLLELTLTELFVFRFMQTDPNWSNFLYD 424

Query: 362  ERTNVINLIDFGAAREYRKSFVDDYLRMVLACANCDRDAVVEMSQRLGFLTGMESEVMLD 541
            + T  INLIDFGAAR+Y K FVDDYLRMV ACAN DRDAV+EMSQRLGFL+GMESE+M+D
Sbjct: 425  DATRTINLIDFGAARDYPKRFVDDYLRMVYACANGDRDAVIEMSQRLGFLSGMESEIMID 484

Query: 542  AHVQAGFVVGLPFAKPGGFDFRSTNITQSISNLGATMLKHRLTPPPDEVYSLHRKLSGAF 721
             HVQAGFVVG PF+KPGG+DFRS+NITQSI+NLGATML+HRL PPPDEVYSLHRKLSGAF
Sbjct: 485  VHVQAGFVVGFPFSKPGGYDFRSSNITQSITNLGATMLRHRLRPPPDEVYSLHRKLSGAF 544

Query: 722  LACIKLGAIVPCRELLLQVHDQYQFGXXXXXVQSRISIS 838
            LACIKLGA+VPCRELLLQV++QYQFG     + S  S+S
Sbjct: 545  LACIKLGAVVPCRELLLQVYEQYQFGEEGGEILSSASVS 583


>ref|XP_002515159.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
            gi|223545639|gb|EEF47143.1| Ubiquinone biosynthesis
            protein coq-8, putative [Ricinus communis]
          Length = 620

 Score =  424 bits (1089), Expect = e-116
 Identities = 201/266 (75%), Positives = 235/266 (88%)
 Frame = +2

Query: 2    LLDYTNLLPKGLYLDSAMKVAEEELARECDYELEASNQKRFYDLLSNTEGFYVPIVIDDI 181
            LLDYTNL+PKGL+LD AMKVA+EEL+RECDYELEA NQK+F  LLS  +GFYVP+V+D +
Sbjct: 341  LLDYTNLIPKGLFLDRAMKVAKEELSRECDYELEAINQKQFCKLLSGVKGFYVPMVVDKL 400

Query: 182  LTKRIITTELVTGVPIDKVALLSQETRDYVGXXXXXXXXXXXFVFRFMQTDPNWSNFLYE 361
               R++TTELV+G+PIDKVALL+QETR+YVG           FVFRFMQTDPNWSNFLY+
Sbjct: 401  SCNRVLTTELVSGIPIDKVALLNQETRNYVGTKLLELTLMELFVFRFMQTDPNWSNFLYD 460

Query: 362  ERTNVINLIDFGAAREYRKSFVDDYLRMVLACANCDRDAVVEMSQRLGFLTGMESEVMLD 541
            E T  +NLIDFGAAR Y KSFVDDYLRMV+ACAN +RDAV+EMS+RLGFLTGMESE+MLD
Sbjct: 461  EATETVNLIDFGAARAYPKSFVDDYLRMVVACANGERDAVIEMSRRLGFLTGMESEIMLD 520

Query: 542  AHVQAGFVVGLPFAKPGGFDFRSTNITQSISNLGATMLKHRLTPPPDEVYSLHRKLSGAF 721
            AH+QAGF+VGLPF+KPGGFDF STNITQS++NLGATML+HRLTPPP+E YSLHRKLSGAF
Sbjct: 521  AHIQAGFIVGLPFSKPGGFDFGSTNITQSVTNLGATMLRHRLTPPPEESYSLHRKLSGAF 580

Query: 722  LACIKLGAIVPCRELLLQVHDQYQFG 799
            LACIKLGA+VPCR+LLL V++ Y+FG
Sbjct: 581  LACIKLGAVVPCRQLLLDVYENYEFG 606


>ref|XP_003535303.1| PREDICTED: chaperone activity of bc1 complex-like, mitochondrial-like
            [Glycine max]
          Length = 611

 Score =  422 bits (1086), Expect = e-116
 Identities = 202/266 (75%), Positives = 236/266 (88%)
 Frame = +2

Query: 2    LLDYTNLLPKGLYLDSAMKVAEEELARECDYELEASNQKRFYDLLSNTEGFYVPIVIDDI 181
            LL+YTNL+PKGLYLD A+KVA+EEL+RECDY+LEA+NQKRF DLL+ T+G YVPIV+DDI
Sbjct: 333  LLNYTNLIPKGLYLDRAIKVAKEELSRECDYKLEAANQKRFRDLLTGTDGLYVPIVVDDI 392

Query: 182  LTKRIITTELVTGVPIDKVALLSQETRDYVGXXXXXXXXXXXFVFRFMQTDPNWSNFLYE 361
             +KR++TTELV G+ IDKVALL QETR+Y+G           FVF+FMQTDPNW NFL++
Sbjct: 393  SSKRVLTTELVHGITIDKVALLDQETRNYIGKKLLELTLMELFVFQFMQTDPNWGNFLFD 452

Query: 362  ERTNVINLIDFGAAREYRKSFVDDYLRMVLACANCDRDAVVEMSQRLGFLTGMESEVMLD 541
            E T  INLIDFGAAR+Y K+FVDDYLRMVLACAN D D VVEMS+RLGFLTGMES+VMLD
Sbjct: 453  EATKTINLIDFGAARDYPKTFVDDYLRMVLACANGDSDGVVEMSRRLGFLTGMESDVMLD 512

Query: 542  AHVQAGFVVGLPFAKPGGFDFRSTNITQSISNLGATMLKHRLTPPPDEVYSLHRKLSGAF 721
            AHVQAGF+VGLPF++PGGFDFRSTNITQSIS+LGATML+HRLTPPPDE YSLHRKLSGAF
Sbjct: 513  AHVQAGFIVGLPFSRPGGFDFRSTNITQSISHLGATMLRHRLTPPPDEAYSLHRKLSGAF 572

Query: 722  LACIKLGAIVPCRELLLQVHDQYQFG 799
            LACIK+GA+VPCRELLL+V+  ++FG
Sbjct: 573  LACIKIGAVVPCRELLLEVYKHHKFG 598


>ref|XP_003519721.1| PREDICTED: chaperone activity of bc1 complex-like, mitochondrial-like
            [Glycine max]
          Length = 618

 Score =  422 bits (1086), Expect = e-116
 Identities = 202/266 (75%), Positives = 236/266 (88%)
 Frame = +2

Query: 2    LLDYTNLLPKGLYLDSAMKVAEEELARECDYELEASNQKRFYDLLSNTEGFYVPIVIDDI 181
            LL+YTNL+PKGLYLD A+KVA+EEL+RECDY+LEA+NQKRF DLL+ T+GFYVPIV+D+I
Sbjct: 340  LLNYTNLIPKGLYLDRAIKVAKEELSRECDYKLEAANQKRFRDLLTGTDGFYVPIVVDNI 399

Query: 182  LTKRIITTELVTGVPIDKVALLSQETRDYVGXXXXXXXXXXXFVFRFMQTDPNWSNFLYE 361
             +KR++TTELV G+ IDKVALL QETR+Y+G           FVFRFMQTDPNW NFL++
Sbjct: 400  SSKRVLTTELVRGITIDKVALLDQETRNYIGKKLLELTLMELFVFRFMQTDPNWGNFLFD 459

Query: 362  ERTNVINLIDFGAAREYRKSFVDDYLRMVLACANCDRDAVVEMSQRLGFLTGMESEVMLD 541
            E T  INLIDFGAAR+Y K FVDDYLRMVLACAN D D V+EMS+RLGFLTGMES+VMLD
Sbjct: 460  EVTKTINLIDFGAARDYPKRFVDDYLRMVLACANGDSDGVIEMSRRLGFLTGMESDVMLD 519

Query: 542  AHVQAGFVVGLPFAKPGGFDFRSTNITQSISNLGATMLKHRLTPPPDEVYSLHRKLSGAF 721
            AHVQAGF+VGLPF++PGGFDF+STNITQSIS+LGATMLKHRLTPPPDE YSLHRKLSGAF
Sbjct: 520  AHVQAGFIVGLPFSRPGGFDFQSTNITQSISHLGATMLKHRLTPPPDEAYSLHRKLSGAF 579

Query: 722  LACIKLGAIVPCRELLLQVHDQYQFG 799
            LACIK+GA+VPCRELLL+V+  ++FG
Sbjct: 580  LACIKIGAVVPCRELLLEVYKHHKFG 605


>ref|XP_002874966.1| ABC1 protein [Arabidopsis lyrata subsp. lyrata]
            gi|297320803|gb|EFH51225.1| ABC1 protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 622

 Score =  410 bits (1055), Expect = e-112
 Identities = 197/265 (74%), Positives = 230/265 (86%)
 Frame = +2

Query: 2    LLDYTNLLPKGLYLDSAMKVAEEELARECDYELEASNQKRFYDLLSNTEGFYVPIVIDDI 181
            LL+YTNL+PKGL+LD A+KVA+EELA+ECDYE+EA +QKRF DLLS+T GFYVP+V+D+I
Sbjct: 341  LLNYTNLIPKGLFLDRAIKVAKEELAQECDYEIEAVSQKRFRDLLSDTPGFYVPLVVDEI 400

Query: 182  LTKRIITTELVTGVPIDKVALLSQETRDYVGXXXXXXXXXXXFVFRFMQTDPNWSNFLYE 361
             +K+I+TTEL++G+PIDKVALL Q+TRDYVG           FVFRFMQTDPNW NFLY 
Sbjct: 401  SSKKILTTELISGIPIDKVALLDQKTRDYVGRKMLELTLKELFVFRFMQTDPNWGNFLYN 460

Query: 362  ERTNVINLIDFGAAREYRKSFVDDYLRMVLACANCDRDAVVEMSQRLGFLTGMESEVMLD 541
            E T  INLIDFGAAR+Y K FVDDYLRMV+ACA  D + V+EMS+RLGFLTG ES+VMLD
Sbjct: 461  EATKTINLIDFGAARDYPKKFVDDYLRMVMACAEKDSEGVIEMSRRLGFLTGDESDVMLD 520

Query: 542  AHVQAGFVVGLPFAKPGGFDFRSTNITQSISNLGATMLKHRLTPPPDEVYSLHRKLSGAF 721
            AHVQAGF+VGLPFA+PGG+ FR+ NI  SISNLGATMLKHRLTPPPDE YSLHRKLSGAF
Sbjct: 521  AHVQAGFIVGLPFAEPGGYAFRTNNIASSISNLGATMLKHRLTPPPDEAYSLHRKLSGAF 580

Query: 722  LACIKLGAIVPCRELLLQVHDQYQF 796
            LACIKLGA VPCR+LLLQV+++YQF
Sbjct: 581  LACIKLGATVPCRDLLLQVYNKYQF 605