BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028976
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containi...   151   8e-35
ref|XP_002328557.1| predicted protein [Populus trichocarpa] gi|2...   149   6e-34
ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containi...   142   7e-32
ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containi...   139   3e-31
ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago t...   137   1e-30

>ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 643

 Score =  151 bits (382), Expect = 8e-35
 Identities = 69/86 (80%), Positives = 80/86 (93%)
 Frame = +2

Query: 2   SVLHDIEEEEKENAVSMHSEKLAVAFGISRLCRGSIIRVVKNLRVCRDCHTAMKLISEVY 181
           SVLHDIE+EEKE++VS HSEKLAVAFGI+RLC+GSIIR+VKNLRVCRDCHT MKLIS+VY
Sbjct: 558 SVLHDIEDEEKEDSVSRHSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLISKVY 617

Query: 182 NWQIVLRDRNRFHSFQDGHCSCRDYW 259
             +IV+RDR+RFHSF+ G CSCRDYW
Sbjct: 618 GLEIVVRDRSRFHSFKTGSCSCRDYW 643


>ref|XP_002328557.1| predicted protein [Populus trichocarpa] gi|222838272|gb|EEE76637.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  149 bits (375), Expect = 6e-34
 Identities = 65/85 (76%), Positives = 78/85 (91%)
 Frame = +2

Query: 5   VLHDIEEEEKENAVSMHSEKLAVAFGISRLCRGSIIRVVKNLRVCRDCHTAMKLISEVYN 184
           VLHDIEEEEKE +VS+HSEKLAVAFGI+RLC+G  IR+VKNLR+CRDCH  MKLIS++Y 
Sbjct: 559 VLHDIEEEEKEGSVSVHSEKLAVAFGIARLCKGRTIRIVKNLRICRDCHAVMKLISQIYK 618

Query: 185 WQIVLRDRNRFHSFQDGHCSCRDYW 259
            +IV+RDR+RFHSF+DG+CSCRDYW
Sbjct: 619 VEIVVRDRSRFHSFKDGYCSCRDYW 643


>ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 640

 Score =  142 bits (357), Expect = 7e-32
 Identities = 64/86 (74%), Positives = 77/86 (89%)
 Frame = +2

Query: 2   SVLHDIEEEEKENAVSMHSEKLAVAFGISRLCRGSIIRVVKNLRVCRDCHTAMKLISEVY 181
           SVLHDIEEEEKE++VS HSEKLA AFGI++L +G I+R+VKNLRVC DCHT MKLIS+VY
Sbjct: 555 SVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVY 614

Query: 182 NWQIVLRDRNRFHSFQDGHCSCRDYW 259
             +I++RDR+RFHSF+DG CSCRDYW
Sbjct: 615 QVEIIVRDRSRFHSFKDGFCSCRDYW 640


>ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
           gi|449487109|ref|XP_004157499.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
          Length = 642

 Score =  139 bits (351), Expect = 3e-31
 Identities = 65/86 (75%), Positives = 75/86 (87%)
 Frame = +2

Query: 2   SVLHDIEEEEKENAVSMHSEKLAVAFGISRLCRGSIIRVVKNLRVCRDCHTAMKLISEVY 181
           SVLHDIE EEKE++VS HSEKLAVAFG+++L RG  IRVVKNLR+CRDCHT MKLIS+VY
Sbjct: 557 SVLHDIEVEEKEDSVSQHSEKLAVAFGMAKLPRGRAIRVVKNLRICRDCHTVMKLISKVY 616

Query: 182 NWQIVLRDRNRFHSFQDGHCSCRDYW 259
             +IV+RDR+RFHSF  G CSCRDYW
Sbjct: 617 EVEIVVRDRSRFHSFTHGSCSCRDYW 642


>ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355510124|gb|AES91266.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 611

 Score =  137 bits (346), Expect = 1e-30
 Identities = 61/86 (70%), Positives = 76/86 (88%)
 Frame = +2

Query: 2   SVLHDIEEEEKENAVSMHSEKLAVAFGISRLCRGSIIRVVKNLRVCRDCHTAMKLISEVY 181
           SVLHD+EEEEKE+++S HSEKLA AFGI++L +G I+R+VKNLRVC DCHT MKLIS+VY
Sbjct: 526 SVLHDVEEEEKEDSMSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVY 585

Query: 182 NWQIVLRDRNRFHSFQDGHCSCRDYW 259
             +I++RDR+RFHSF+ G CSCRDYW
Sbjct: 586 QVEIIVRDRSRFHSFKGGFCSCRDYW 611