BLASTX nr result

ID: Coptis21_contig00028964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028964
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein ...   341   1e-91
emb|CBI32505.3| unnamed protein product [Vitis vinifera]              340   3e-91
ref|XP_002522369.1| conserved hypothetical protein [Ricinus comm...   340   3e-91
ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|2...   330   3e-88
gb|ABR16110.1| unknown [Picea sitchensis]                             320   4e-85

>ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Vitis
           vinifera]
          Length = 547

 Score =  341 bits (874), Expect = 1e-91
 Identities = 161/255 (63%), Positives = 197/255 (77%), Gaps = 3/255 (1%)
 Frame = +2

Query: 122 VIIGLWPMHVIWTYYCIAKTKNFGTIMKGVLFISLLIPLLVWLPIGFIGSLFAGLGYGFY 301
           V++GLWP H++WT YCI +TK F   +K +L + + IP+ +W  +G +GS+  G+GYGF 
Sbjct: 50  VVVGLWPCHLVWTVYCIVRTKKFDPYLKCLLILMVPIPVALWTVVGVVGSVIMGIGYGFI 109

Query: 302 WPLMATFEAVG-EGVS--NKFVRCFKDGTWSSVLGGCTIVRDFADVSFHSYFSVMDSWLE 472
            P+M TF+AV  EGVS   K +RCF DGTWS+V G CTIVRDFAD SFHSYFSVMD  LE
Sbjct: 110 CPVMDTFKAVSMEGVSLRTKLIRCFTDGTWSNVWGACTIVRDFADFSFHSYFSVMDGLLE 169

Query: 473 STTESPIEIKVSQIPGCMLVAILGILVDVPFIAMIVIYKVPFMLFKGWHRLVRDLIGRSG 652
           S  E PIE+KV +IPGC+L AILG+LVDVPFI +IV+YK P +LFKGW++L+ DLIGR G
Sbjct: 170 SKGEKPIELKVFEIPGCILCAILGVLVDVPFITLIVLYKSPILLFKGWNQLLHDLIGREG 229

Query: 653 PFLETVCVPFAGLSILLWPIAVALTSLAGICSGFFLGLYAAAVAYQENSTKSGLLYVVAV 832
           PF ET+CVPFAGL ILLWPI V L +LAG+ S FF G  AA +AYQE+S K GLLY+VA 
Sbjct: 230 PFFETICVPFAGLLILLWPIVVVLAALAGVISSFFFGCCAAVIAYQESSIKRGLLYIVAS 289

Query: 833 SALFDEYTNDFLYLR 877
            +LFDE TNDFLYLR
Sbjct: 290 MSLFDESTNDFLYLR 304


>emb|CBI32505.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  340 bits (872), Expect = 3e-91
 Identities = 161/255 (63%), Positives = 197/255 (77%), Gaps = 3/255 (1%)
 Frame = +2

Query: 122 VIIGLWPMHVIWTYYCIAKTKNFGTIMKGVLFISLLIPLLVWLPIGFIGSLFAGLGYGFY 301
           V++GLWP H++WT YCI +TK F   +K +L + + IP+ +W  +G +GS+  G+GYGF 
Sbjct: 50  VVVGLWPCHLVWTVYCINRTKKFDPYLKCLLILMVPIPVALWTVVGVVGSVIMGIGYGFI 109

Query: 302 WPLMATFEAVG-EGVS--NKFVRCFKDGTWSSVLGGCTIVRDFADVSFHSYFSVMDSWLE 472
            P+M TF+AV  EGVS   K +RCF DGTWS+V G CTIVRDFAD SFHSYFSVMD  LE
Sbjct: 110 CPVMDTFKAVSMEGVSLRTKLIRCFTDGTWSNVWGACTIVRDFADFSFHSYFSVMDGLLE 169

Query: 473 STTESPIEIKVSQIPGCMLVAILGILVDVPFIAMIVIYKVPFMLFKGWHRLVRDLIGRSG 652
           S  E PIE+KV +IPGC+L AILG+LVDVPFI +IV+YK P +LFKGW++L+ DLIGR G
Sbjct: 170 SKGEKPIELKVFEIPGCILCAILGVLVDVPFITLIVLYKSPILLFKGWNQLLHDLIGREG 229

Query: 653 PFLETVCVPFAGLSILLWPIAVALTSLAGICSGFFLGLYAAAVAYQENSTKSGLLYVVAV 832
           PF ET+CVPFAGL ILLWPI V L +LAG+ S FF G  AA +AYQE+S K GLLY+VA 
Sbjct: 230 PFFETICVPFAGLLILLWPIVVVLAALAGVISSFFFGCCAAVIAYQESSIKRGLLYIVAS 289

Query: 833 SALFDEYTNDFLYLR 877
            +LFDE TNDFLYLR
Sbjct: 290 MSLFDESTNDFLYLR 304


>ref|XP_002522369.1| conserved hypothetical protein [Ricinus communis]
           gi|223538447|gb|EEF40053.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 550

 Score =  340 bits (871), Expect = 3e-91
 Identities = 159/257 (61%), Positives = 197/257 (76%), Gaps = 3/257 (1%)
 Frame = +2

Query: 116 SAVIIGLWPMHVIWTYYCIAKTKNFGTIMKGVLFISLLIPLLVWLPIGFIGSLFAGLGYG 295
           + V+IGLWP+H++W+ YC+ KTK FG  MK +L + + +P+++W  IG  GS   G GYG
Sbjct: 48  TGVVIGLWPLHLVWSIYCLIKTKKFGPYMKCLLILLVPVPIVLWTVIGVAGSAIMGAGYG 107

Query: 296 FYWPLMATFEAVG-EGVSN-KFVRCFKDGTWSSVLGGCTIVRDFADVSFHSYFSVMDSWL 469
           F WP+M TF A+  EG  N K +RCF +GTW+ V G CT+VRDFAD SFHSYFSVMD  L
Sbjct: 108 FIWPVMETFRAISMEGPINMKLIRCFTEGTWTCVWGACTVVRDFADFSFHSYFSVMDGLL 167

Query: 470 ESTTES-PIEIKVSQIPGCMLVAILGILVDVPFIAMIVIYKVPFMLFKGWHRLVRDLIGR 646
           +S  E  PIE+K++Q+PGC+L A L ILVDVP I +IV+YK P +LFKGWHRL++DLIGR
Sbjct: 168 KSKDEEEPIELKIAQVPGCILAACLAILVDVPVITIIVVYKAPILLFKGWHRLIQDLIGR 227

Query: 647 SGPFLETVCVPFAGLSILLWPIAVALTSLAGICSGFFLGLYAAAVAYQENSTKSGLLYVV 826
           +GPF ETVC+PFAG  ILLWPI V L +LAGI S F  G YAA VAYQENSTK GLLYVV
Sbjct: 228 AGPFFETVCIPFAGFWILLWPIVVLLATLAGIVSSFGFGCYAAVVAYQENSTKRGLLYVV 287

Query: 827 AVSALFDEYTNDFLYLR 877
           A +++FDEYTND LYL+
Sbjct: 288 ASASVFDEYTNDLLYLQ 304


>ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|222853077|gb|EEE90624.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  330 bits (846), Expect = 3e-88
 Identities = 155/256 (60%), Positives = 189/256 (73%), Gaps = 2/256 (0%)
 Frame = +2

Query: 116 SAVIIGLWPMHVIWTYYCIAKTKNFGTIMKGVLFISLLIPLLVWLPIGFIGSLFAGLGYG 295
           + ++IGLWP+H+IW+ YCI K+K FG  MK +L + + +P+ +W  +G +GS   G  YG
Sbjct: 48  TGIVIGLWPLHLIWSMYCIIKSKRFGPYMKCLLILLVPLPVALWTVVGVVGSAIMGAMYG 107

Query: 296 FYWPLMATFEAVGE--GVSNKFVRCFKDGTWSSVLGGCTIVRDFADVSFHSYFSVMDSWL 469
           F WP+M TF A+ +   +  K +RCF DGTWS V G CT+VRDF D SFHSYFSVMD  L
Sbjct: 108 FIWPVMETFRAISKEGSICMKLIRCFTDGTWSCVRGACTVVRDFVDFSFHSYFSVMDELL 167

Query: 470 ESTTESPIEIKVSQIPGCMLVAILGILVDVPFIAMIVIYKVPFMLFKGWHRLVRDLIGRS 649
            S  E PIE+KV+QIPGC+L AILGI+VDV  I MIV+ K P ML KGWHRL++DLIGR 
Sbjct: 168 ASKGEEPIELKVAQIPGCILAAILGIVVDVHVITMIVLLKAPLMLLKGWHRLIQDLIGRE 227

Query: 650 GPFLETVCVPFAGLSILLWPIAVALTSLAGICSGFFLGLYAAAVAYQENSTKSGLLYVVA 829
           GPFLETVCVPFA L ILLWPI V L   AGI S    G +AA VAYQENSTK GLLYV+A
Sbjct: 228 GPFLETVCVPFASLWILLWPIMVLLAIAAGIISSLGFGCFAAVVAYQENSTKRGLLYVIA 287

Query: 830 VSALFDEYTNDFLYLR 877
            +++FDEYTND LYL+
Sbjct: 288 SASIFDEYTNDLLYLQ 303


>gb|ABR16110.1| unknown [Picea sitchensis]
          Length = 605

 Score =  320 bits (819), Expect = 4e-85
 Identities = 150/256 (58%), Positives = 185/256 (72%), Gaps = 2/256 (0%)
 Frame = +2

Query: 116 SAVIIGLWPMHVIWTYYCIAKTKNFGTIMKGVLFISLLIPLLVWLPIGFIGSLFAGLGYG 295
           SAVI GLWP HVIWTY C+ + K  G  +K VL I L +PL++W  +G  GS+  GLGYG
Sbjct: 48  SAVIFGLWPAHVIWTYVCVVRAKRLGPNLKAVLCIGLPVPLILWPLVGLTGSILVGLGYG 107

Query: 296 FYWPLMATFEAVGEGVSNKFVRCFKDGTWSSVLGGCTIVRDFADVSFHSYFSVMDSWLES 475
            + PL+ATFEA+GE   NKFV C   GTWS+V G  T+VRD  D  FHSYFS+MD   E 
Sbjct: 108 LFTPLVATFEAIGEEHENKFVDCILKGTWSTVKGSFTVVRDVTDTCFHSYFSLMDDLREQ 167

Query: 476 TTE--SPIEIKVSQIPGCMLVAILGILVDVPFIAMIVIYKVPFMLFKGWHRLVRDLIGRS 649
             +  SP++IK+ ++PG +LV +LG++VDVP I +I ++K P+ML KGWHRLV DLIGR 
Sbjct: 168 PPKNGSPLDIKLLELPGSLLVGLLGVIVDVPMIVLIALWKSPYMLLKGWHRLVHDLIGRE 227

Query: 650 GPFLETVCVPFAGLSILLWPIAVALTSLAGICSGFFLGLYAAAVAYQENSTKSGLLYVVA 829
           GPF+ETVCVPFAGL+ILLWP+ V    L+   S FFLG YAA V YQE+S K GL YVV+
Sbjct: 228 GPFMETVCVPFAGLAILLWPLVVIAAVLSAFVSSFFLGFYAAVVVYQESSIKLGLAYVVS 287

Query: 830 VSALFDEYTNDFLYLR 877
             ALFDEY NDFLY+R
Sbjct: 288 ALALFDEYANDFLYMR 303


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