BLASTX nr result

ID: Coptis21_contig00028948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028948
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW61007.1| hypothetical protein ZEAMMB73_735189, partial [Ze...   112   4e-23
gb|AFW61006.1| hypothetical protein ZEAMMB73_735189 [Zea mays]        112   4e-23
emb|CBI24131.3| unnamed protein product [Vitis vinifera]              111   7e-23
ref|XP_002265699.1| PREDICTED: general transcription factor 3C p...   111   7e-23
gb|EEC67983.1| hypothetical protein OsI_35748 [Oryza sativa Indi...   109   2e-22

>gb|AFW61007.1| hypothetical protein ZEAMMB73_735189, partial [Zea mays]
          Length = 290

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/77 (67%), Positives = 63/77 (81%)
 Frame = -3

Query: 232 YYKVISRLENKLSRPSKFLIHMRRAHPKCVAPIIISGHKFTMISQHQSAARKYLSAYKLQ 53
           YYKV+SR+E++     K+L+  R A+P CV PIIISGH+FT ISQHQSAAR YL AYKL 
Sbjct: 94  YYKVVSRIEDRFPHHFKYLLRTREANPDCVPPIIISGHRFTAISQHQSAARDYLEAYKLD 153

Query: 52  PDSPLINLCVGTALINL 2
           P++PLINLCVGTALI+L
Sbjct: 154 PENPLINLCVGTALISL 170


>gb|AFW61006.1| hypothetical protein ZEAMMB73_735189 [Zea mays]
          Length = 676

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/77 (67%), Positives = 63/77 (81%)
 Frame = -3

Query: 232 YYKVISRLENKLSRPSKFLIHMRRAHPKCVAPIIISGHKFTMISQHQSAARKYLSAYKLQ 53
           YYKV+SR+E++     K+L+  R A+P CV PIIISGH+FT ISQHQSAAR YL AYKL 
Sbjct: 480 YYKVVSRIEDRFPHHFKYLLRTREANPDCVPPIIISGHRFTAISQHQSAARDYLEAYKLD 539

Query: 52  PDSPLINLCVGTALINL 2
           P++PLINLCVGTALI+L
Sbjct: 540 PENPLINLCVGTALISL 556


>emb|CBI24131.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/77 (68%), Positives = 62/77 (80%)
 Frame = -3

Query: 232 YYKVISRLENKLSRPSKFLIHMRRAHPKCVAPIIISGHKFTMISQHQSAARKYLSAYKLQ 53
           YYKVISRLEN+ S+ SK L  MR  H  CV PI+I GH+FTMISQHQ AA++YL AYKL 
Sbjct: 720 YYKVISRLENRYSKHSKLLHSMRVRHKDCVPPIVIFGHQFTMISQHQIAAKEYLEAYKLM 779

Query: 52  PDSPLINLCVGTALINL 2
           P++PLINLC GTALIN+
Sbjct: 780 PENPLINLCAGTALINI 796


>ref|XP_002265699.1| PREDICTED: general transcription factor 3C polypeptide 3-like [Vitis
            vinifera]
          Length = 1110

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/77 (68%), Positives = 62/77 (80%)
 Frame = -3

Query: 232  YYKVISRLENKLSRPSKFLIHMRRAHPKCVAPIIISGHKFTMISQHQSAARKYLSAYKLQ 53
            YYKVISRLEN+ S+ SK L  MR  H  CV PI+I GH+FTMISQHQ AA++YL AYKL 
Sbjct: 915  YYKVISRLENRYSKHSKLLHSMRVRHKDCVPPIVIFGHQFTMISQHQIAAKEYLEAYKLM 974

Query: 52   PDSPLINLCVGTALINL 2
            P++PLINLC GTALIN+
Sbjct: 975  PENPLINLCAGTALINI 991


>gb|EEC67983.1| hypothetical protein OsI_35748 [Oryza sativa Indica Group]
          Length = 931

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/77 (67%), Positives = 61/77 (79%)
 Frame = -3

Query: 232 YYKVISRLENKLSRPSKFLIHMRRAHPKCVAPIIISGHKFTMISQHQSAARKYLSAYKLQ 53
           YYKV SR+E++ SR  KFL+ +R     CV PIIISGH+FT ISQHQSAAR YL AYKL 
Sbjct: 735 YYKVTSRIEDRFSRHHKFLLRIREEKTDCVPPIIISGHRFTAISQHQSAARDYLEAYKLN 794

Query: 52  PDSPLINLCVGTALINL 2
           P++P INLCVG+ALINL
Sbjct: 795 PENPFINLCVGSALINL 811


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